RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 BPGMP07738 259 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 RARBP10826 455 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 MLNP12872 115 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 GLUD2P49448 558 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 PPIDQ08752 370 aaKnown RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 TUBB3Q13509 450 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 CYLC2Q14093 348 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.134e-7■■□□□ 13.1
PTBP1-204ENST00000394601 NADK2Q4G0N4 442 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 PIGZQ86VD9 579 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 PTPN18Q99952 460 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 ARMC7Q9H6L4 198 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 XAB2Q9HCS7 855 aaKnown RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 RCOR3Q9P2K3 495 aaPredicted RBP15.89■□□□□ 0.13
PTBP1-204ENST00000394601 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
PTBP1-204ENST00000394601 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 PROCP04070 461 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 RAG1P15918 1043 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 ARRB2P32121 409 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 LILRA4P59901 499 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 SNX17Q15036 470 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 IQSEC1Q6DN90 963 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 KLHDC10Q6PID8 442 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 ARPINQ7Z6K5 226 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
PTBP1-204ENST00000394601 ICA1LQ8NDH6 482 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 TFB1MQ8WVM0 346 aaKnown RBP15.88■□□□□ 0.13
PTBP1-204ENST00000394601 PGLYRP2Q96PD5 576 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 HNRNPABQ99729 332 aaKnown RBP15.88■□□□□ 0.13
PTBP1-204ENST00000394601 EBF4Q9BQW3 602 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 EIF2B3Q9NR50 452 aaKnown RBP15.88■□□□□ 0.13
PTBP1-204ENST00000394601 TMEM30AQ9NV96 361 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 KCNK4Q9NYG8 393 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 SCN4AP35499 1836 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 TRIM43BA6NCK2 446 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 HACD1B0YJ81 288 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 H3BSA7 217 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 I3L4J1 428 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 HAS3O00219 553 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 CLDN5O00501 218 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 NAA20P61599 178 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 CDK18Q07002 472 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 HFE2Q6ZVN8 426 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 PTAR1Q7Z6K3 402 aaPredicted RBP15.88■□□□□ 0.13
PTBP1-204ENST00000394601 P2RY11Q96G91 374 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 SLC2A13Q96QE2 648 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 DUSP16Q9BY84 665 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 ZNF510Q9Y2H8 683 aa15.88■□□□□ 0.13
PTBP1-204ENST00000394601 A0A1B0GTW7 788 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FAM72CH0Y354 149 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PTGESO14684 152 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 GABRDO14764 452 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 DCLK1O15075 740 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 WARSP23381 471 aaKnown RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 STT3AP46977 705 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PDE1BQ01064 536 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 ADIGQ0VDE8 80 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 SEMA3BQ13214 749 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FAM72AQ5TYM5 149 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 HEATR6Q6AI08 1181 aaKnown RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FAM72DQ6L9T8 149 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FAM72BQ86X60 149 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PSTKQ8IV42 348 aaKnown RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 B3GALNT2Q8NCR0 500 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 E2F7Q96AV8 911 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PIH1D1Q9NWS0 290 aaKnown RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 ADAMTS6Q9UKP5 1117 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 SF3B1O75533 1304 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■■ 39.9
PTBP1-204ENST00000394601 BIRC5O15392 142 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 DAB1O75553 588 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 ACADSBP45954 432 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FOLH1Q04609 750 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 OLIG2Q13516 323 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 CHI3L2Q15782 390 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PRAMEF19Q5SWL8 479 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 STXBP5Q5T5C0 1151 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 MBLAC2Q68D91 279 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 TMPRSS6Q8IU80 811 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 COLGALT1Q8NBJ5 622 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 STKLD1Q8NE28 680 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 DNAJB3Q8WWF6 145 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 DPF3Q92784 378 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 SLC10A4Q96EP9 437 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 NR1H4Q96RI1 486 aaPredicted RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 CCDC106Q9BWC9 280 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 ACSS2Q9NR19 701 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PIGVQ9NUD9 493 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PLA2G4CQ9UP65 541 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 MAD1L1Q9Y6D9 718 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 KRT38O76015 456 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 SNX16P57768 344 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 PAFAH1B3Q15102 231 aaKnown RBP15.87■□□□□ 0.13
PTBP1-204ENST00000394601 CNGA3Q16281 694 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 CLEC20AQ6ZU45 233 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 HPS6Q86YV9 775 aa15.87■□□□□ 0.13
PTBP1-204ENST00000394601 NDUFAF2Q8N183 169 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms