RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CDH5P33151 784 aaPredicted RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 IL1RL1Q01638 556 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 GRIK3Q13003 919 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 PRKAA1Q13131 559 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SLC5A9Q2M3M2 681 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SLC9B1Q4ZJI4 515 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ZNF470Q6ECI4 717 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 RBM44Q6ZP01 1051 aaKnown RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SATL1Q86VE3 508 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ZNF567Q8N184 647 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 DNAJB3Q8WWF6 145 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 WDR83Q9BRX9 315 aaKnown RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 C15orf38-AP3S2A0A0A6YYH1 394 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 GCATO75600 419 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 CCNFP41002 786 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 IRF9Q00978 393 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SLC10A2Q12908 348 aaPredicted RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SV2CQ496J9 727 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ARL13AQ5H913 290 aaPredicted RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ARPINQ7Z6K5 226 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 AMIGO2Q86SJ2 522 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 PQLC1Q8N2U9 271 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 CYGBQ8WWM9 190 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 PIF1Q9H611 641 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 SARS2Q9NP81 518 aaKnown RBP16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ETAA1Q9NY74 926 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 NCKIPSDQ9NZQ3 722 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
PCDH1-203ENST00000394536 ANKRD12Q6UB98 2062 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 RREB1Q92766 1687 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 RGSL1A5PLK6 1076 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 TPSB2P20231 275 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 PRKCHP24723 683 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ETFBP38117 255 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 CDK7P50613 346 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 TPSAB1Q15661 275 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 PPM1LQ5SGD2 360 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ARMC3Q5W041 872 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 BTBD8Q5XKL5 378 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 WSCD1Q658N2 575 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ARHGAP22Q7Z5H3 698 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ZNF786Q8N393 782 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 OR52B2Q96RD2 323 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 C20orf27Q9GZN8 174 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 CDH19Q9H159 772 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 SNX10Q9Y5X0 201 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 SAC3D1A6NKF1 404 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ZBTB24O43167 697 aaPredicted RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 MATKP42679 507 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ZNF460Q14592 562 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 CTC1Q2NKJ3 1217 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 SFT2D3Q587I9 215 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 AAGABQ6PD74 315 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 SETD3Q86TU7 594 aaPredicted RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 HAUS8Q9BT25 410 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 XPR1Q9UBH6 696 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 NUMBLQ9Y6R0 609 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 FAM159BA6NKW6 160 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 RAP1GDS1P52306 607 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 LRRC8BQ6P9F7 803 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 KBTBD2Q8IY47 623 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 DNAJC1Q96KC8 554 aaKnown RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 TMEM79Q9BSE2 394 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 DDX43Q9NXZ2 648 aaKnown RBP16.44■□□□□ 0.22
PCDH1-203ENST00000394536 AP4B1Q9Y6B7 739 aa16.44■□□□□ 0.22
PCDH1-203ENST00000394536 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 STX16-NPEPL1H3BU86 382 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 KLF11O14901 512 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 MDM4O15151 490 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 TFEBP19484 476 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 CCR10P46092 362 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 STX5Q13190 355 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 ANO4Q32M45 955 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 DCAF4L1Q3SXM0 396 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 ZBTB49Q6ZSB9 765 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 PDCD6IPQ8WUM4 868 aaKnown RBP16.43■□□□□ 0.22
PCDH1-203ENST00000394536 WNT8BQ93098 351 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 CNDP1Q96KN2 507 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 SIKE1Q9BRV8 207 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 EIF2AQ9BY44 585 aaKnown RBP16.43■□□□□ 0.22
PCDH1-203ENST00000394536 TKTL2Q9H0I9 626 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 LZTS1Q9Y250 596 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 ALDOAP04075 364 aaKnown RBP16.43■□□□□ 0.22
PCDH1-203ENST00000394536 MPOP05164 745 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 HMBSP08397 361 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 MYL4P12829 197 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 CDH17Q12864 832 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 C6orf52Q5T4I8 152 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 DSELQ8IZU8 1212 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 PBXIP1Q96AQ6 731 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 SLC4A5Q9BY07 1137 aa16.43■□□□□ 0.22
PCDH1-203ENST00000394536 OXCT2Q9BYC2 517 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms