RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GOLGB1Q14789 3259 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 RNASEH2AO75792 299 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 POLR2EP19388 210 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 CNTFP26441 200 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 CDH5P33151 784 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 BAG6P46379 1132 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 HARS2P49590 506 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ZNF252P-AS1Q0IIN9 211 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GRSF1Q12849 480 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 RFTN1Q14699 578 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 TMEM132AQ24JP5 1023 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 TRIM16LQ309B1 348 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 C6orf183Q5T699 404 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GPAT2Q6NUI2 795 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ZBTB8OSQ8IWT0 167 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 SLC7A5P1Q8MH63 180 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ACMSDQ8TDX5 336 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 PPP2R3BQ9Y5P8 575 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 SIP14410 1827 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 F8VP50 259 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 EIF3FO00303 357 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ACOT8O14734 319 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 DCXO43602 365 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GAS2O43903 313 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 KDM1AO60341 852 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GCATO75600 419 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 RSL1D1O76021 490 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 NCF2P19878 526 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ME2P23368 584 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 EDNRBP24530 442 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 GNL1P36915 607 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 MXD4Q14582 209 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 LSM12Q3MHD2 195 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 SMUG1Q53HV7 270 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 IRAK1BP1Q5VVH5 260 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 XKR5Q6UX68 686 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 MAMDC4Q6UXC1 1216 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 LBX2Q6XYB7 198 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 POLNQ7Z5Q5 900 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 EXOC8Q8IYI6 725 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ADGRF2Q8IZF7 708 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ACTL9Q8TC94 416 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 TANKQ92844 425 aa19.24■□□□□ 0.67
HOXC6-202ENST00000394331 ACO2Q99798 780 aaKnown RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 NPLQ9BXD5 320 aaPredicted RBP19.24■□□□□ 0.67
HOXC6-202ENST00000394331 LYPLA1O75608 230 aaPredicted RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 TCF4P15884 667 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 OTUD4Q01804 1114 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 PEX6Q13608 980 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 KCNJ11Q14654 390 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 BBS12Q6ZW61 710 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 DSELQ8IZU8 1212 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 RNF169Q8NCN4 708 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 TOP1MTQ969P6 601 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 UHRF1Q96T88 793 aaPredicted RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 NDEL1Q9GZM8 345 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 COQ10BQ9H8M1 238 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 LTBP3Q9NS15 1303 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 CHADO15335 359 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 ZBTB14O43829 449 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 NUDT2P50583 147 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 ATP6V0D1P61421 351 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 PDE1CQ14123 709 aaPredicted RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 AARS2Q5JTZ9 985 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 METTL7BQ6UX53 244 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 CTAGE3PQ8IX95 158 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 RP9Q8TA86 221 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 DUS3LQ96G46 650 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 KLHL32Q96NJ5 620 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 TUBA1CQ9BQE3 449 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 CPSF3Q9UKF6 684 aaKnown RBP19.23■□□□□ 0.67
HOXC6-202ENST00000394331 IFT52Q9Y366 437 aa19.23■□□□□ 0.67
HOXC6-202ENST00000394331 RGSL1A5PLK6 1076 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 C3orf70A6NLC5 250 aaPredicted RBP19.22■□□□□ 0.67
HOXC6-202ENST00000394331 DPYSL3Q14195 570 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 TAZQ16635 292 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 AGAP7PQ5VUJ5 663 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 SCARA3Q6AZY7 606 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 EPGNQ6UW88 154 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 IQCF2Q8IXL9 164 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 CDRT15Q96T59 188 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 C2orf40Q9H1Z8 148 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 A0A1W2PPW3 197 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 MGEA5O60502 916 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 ERBB2P04626 1255 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 PRKCBP05771 671 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 GLDCP23378 1020 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 ADSLP30566 484 aaPredicted RBP19.22■□□□□ 0.67
HOXC6-202ENST00000394331 POLR2BP30876 1174 aaKnown RBP19.22■□□□□ 0.67
HOXC6-202ENST00000394331 OGDHQ02218 1023 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 ZNF394Q53GI3 561 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 SLC15A4Q8N697 577 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 STON2Q8WXE9 905 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 ATP2A3Q93084 1043 aa19.22■□□□□ 0.67
HOXC6-202ENST00000394331 FOXD2O60548 495 aaPredicted RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 ZMPSTE24O75844 475 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 MS4A2Q01362 244 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms