RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PPP1R13BQ96KQ4 1090 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 NOX5Q96PH1 765 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 ARHGAP20Q9P2F6 1191 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 RWDD2AQ9UIY3 292 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 RAXQ9Y2V3 346 aa18.01■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3DA0A087WVF3 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3IA0A087WXS9 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3EA0A087X179 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3KA0A087X1G2 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3FA6NER0 549 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 GOLGA8CPA6NN73 597 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3LB9A6J9 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ENC1O14682 589 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 MCF2LO15068 1137 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 PLRG1O43660 514 aaKnown RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 CLDN11O75508 207 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3HP0C7X1 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 EPHA8P29322 1005 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 STK19P49842 368 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 IL9RQ01113 521 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ILKQ13418 452 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ACAP1Q15027 740 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TAF5Q15542 800 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ACBD5Q5T8D3 534 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 SFMBT2Q5VUG0 894 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3GQ6DHY5 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3CQ6IPX1 549 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 DHRS13Q6UX07 377 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 GBP6Q6ZN66 633 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 C11orf57Q6ZUT1 292 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 PRPF39Q86UA1 669 aaKnown RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 TRIM69Q86WT6 500 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D3Q8IZP1 549 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 DEFB106AQ8N104 65 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ZNF397Q8NF99 534 aaPredicted RBP18■□□□□ 0.47
SNRPA1-202ENST00000394082 OR8D1Q8WZ84 308 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TSC1Q92574 1164 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 CPXM1Q96SM3 734 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 FEM1AQ9BSK4 669 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 ACP6Q9NPH0 428 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 RRN3Q9NYV6 651 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 PPM1HQ9ULR3 514 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 TBC1D30Q9Y2I9 924 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 OR51B4Q9Y5P0 310 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 KNTC1P50748 2209 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 IGSF10Q6WRI0 2623 aa18■□□□□ 0.47
SNRPA1-202ENST00000394082 GOLGA4Q13439 2230 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 BIN1O00499 593 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 WNT9AO14904 365 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 RNGTTO60942 597 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 HNF1BP35680 557 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 CYP4F3Q08477 520 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 AUHQ13825 339 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 COL28A1Q2UY09 1125 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 OLFML1Q6UWY5 402 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 SLC26A9Q7LBE3 791 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 GATAD2AQ86YP4 633 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 ZDHHC17Q8IUH5 632 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 CACTIN-AS1Q8N1I8 211 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 CNDP2Q96KP4 475 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 RPRD1AQ96P16 312 aaPredicted RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 SLC25A13Q9UJS0 675 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 HS3ST2Q9Y278 367 aa17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 SMG1Q96Q15 3661 aaKnown RBP17.99■□□□□ 0.47
SNRPA1-202ENST00000394082 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 C1QTNF3-AMACRE9PGA6 284 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 RFPL3O75679 317 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 VAV1P15498 845 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 SLC9A1P19634 815 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 NOS2P35228 1153 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 PTK2Q05397 1052 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 ZNF177Q13360 481 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 EXOC3L4Q17RC7 722 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 AGBL4Q5VU57 503 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 NEK5Q6P3R8 708 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 C19orf48Q6RUI8 117 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 KANSL1Q7Z3B3 1105 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 CIR1Q86X95 450 aaPredicted RBP17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 C1orf131Q8NDD1 294 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 RNF34Q969K3 372 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 CRACR2AQ9BSW2 395 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 PREBQ9HCU5 417 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 SARDHQ9UL12 918 aa17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 URB1O60287 2271 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-202ENST00000394082 FASNP49327 2511 aaKnown RBP17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 DAB1O75553 588 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 PON1P27169 355 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 ACADVLP49748 655 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 CDH4P55283 916 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 PPP2CBP62714 309 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 PPP2CAP67775 309 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 CCDC15Q0P6D6 951 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 DLG2Q15700 870 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 BRMS1LQ5PSV4 323 aa17.97■□□□□ 0.47
SNRPA1-202ENST00000394082 PRAMEF14Q5SWL7 426 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms