RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DENND1CQ8IV53 801 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 ARHGAP18Q8N392 663 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 RTL3Q8N8U3 475 aaKnown RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 GDAP1Q8TB36 358 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 ATP2A3Q93084 1043 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 RPRD1AQ96P16 312 aaPredicted RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 ZBED2Q9BTP6 218 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 GREB1Q4ZG55 1949 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 ARHGAP42A6NI28 874 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 APOEP02649 317 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 CCNB1P14635 433 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 TPSB2P20231 275 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 SERPINB6P35237 376 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 ACVRL1P37023 503 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 TUFMP49411 452 aaKnown RBP15.3■□□□□ 0.04
MKS1-202ENST00000393119 IHHQ14623 411 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 TPSAB1Q15661 275 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 CERCAMQ5T4B2 595 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 PDZD4Q76G19 769 aaPredicted RBP15.3■□□□□ 0.04
MKS1-202ENST00000393119 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
MKS1-202ENST00000393119 DDX53Q86TM3 631 aaKnown RBP15.3■□□□□ 0.04
MKS1-202ENST00000393119 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 ATPAF2Q8N5M1 289 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 ZNF473Q8WTR7 871 aaKnown RBP15.3■□□□□ 0.04
MKS1-202ENST00000393119 DCAKDQ8WVC6 231 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 CCDC77Q9BR77 488 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 TTLL2Q9BWV7 592 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 ACSS3Q9H6R3 686 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 SUFUQ9UMX1 484 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 PLXNA3P51805 1871 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 PTPRSQ13332 1948 aa15.3■□□□□ 0.04
MKS1-202ENST00000393119 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 TSPAN3O60637 253 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 KRT15P19012 456 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 GEMIN4P57678 1058 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 ERVFC1P60507 584 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 CHSY1Q86X52 802 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 ZNF354CQ86Y25 554 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 CMTR2Q8IYT2 770 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 C7orf61Q8IZ16 206 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 MCUQ8NE86 351 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 BHMTQ93088 406 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 TEKT5Q96M29 485 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 LGALS13Q9UHV8 139 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 A0A0D9SEW6 157 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 FGBP02675 491 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 CSH1P0DML2 217 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 CSH2P0DML3 217 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 LAG3P18627 525 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 DNAJB1P25685 340 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 ALDH1A3P47895 512 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 RPS24P62847 133 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 TAF12Q16514 161 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 QPCTQ16769 361 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 TXNDC8Q6A555 127 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 HS6ST3Q8IZP7 471 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 LGI2Q8N0V4 545 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 C2orf15Q8WU43 125 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 C1orf74Q96LT6 269 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 EBNA1BP2Q99848 306 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 HERC2P3Q9BVR0 1158 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 CATSPERBQ9H7T0 1116 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 MRPL17Q9NRX2 175 aaKnown RBP15.29■□□□□ 0.04
MKS1-202ENST00000393119 IGSF9Q9P2J2 1179 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
MKS1-202ENST00000393119 HIDE1A8MVS5 230 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 TGM5O43548 720 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ATP9BO43861 1147 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 HLA-DQB2P05538 268 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 MX2P20592 715 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ATP5C1P36542 298 aaKnown RBP15.28■□□□□ 0.04
MKS1-202ENST00000393119 FDFT1P37268 417 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ETFBP38117 255 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 BMPR2Q13873 1038 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 FAM133BQ5BKY9 247 aaKnown RBP15.28■□□□□ 0.04
MKS1-202ENST00000393119 STXBP5Q5T5C0 1151 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 PPP1R21Q6ZMI0 780 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ZNF778Q96MU6 729 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 FCRL3Q96P31 734 aaPredicted RBP15.28■□□□□ 0.04
MKS1-202ENST00000393119 ZYG11BQ9C0D3 744 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 ZNF212Q9UDV6 495 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 IPO11Q9UI26 975 aaKnown RBP15.28■□□□□ 0.04
MKS1-202ENST00000393119 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 LILRB3O75022 631 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 GMPRP36959 345 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 SLC10A7Q0GE19 358 aa15.28■□□□□ 0.04
MKS1-202ENST00000393119 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms