RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 DONSONQ9NYP3 566 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 NINJ2Q9NZG7 142 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 FRRS1LQ9P0K9 344 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 SPASTQ9UBP0 616 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZMAT5Q9UDW3 170 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 IL19Q9UHD0 177 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 CNTN6Q9UQ52 1028 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PIN4Q9Y237 131 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 ASB1Q9Y576 335 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 URB2Q14146 1524 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 ATP2C2O75185 946 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PALMO75781 387 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 AGFG2O95081 481 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PRAMEF12O95522 483 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PFKMP08237 780 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 IL2RBP14784 551 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZNF37AP17032 561 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 SMPD1P17405 629 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GPD2P43304 727 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PPP2R2BQ00005 443 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PTH1RQ03431 593 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ARHGEF6Q15052 776 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 RAB41Q5JT25 222 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 RAET1GQ6H3X3 334 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 DGAT2L7PQ6IED9 249 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 SUSD1Q6UWL2 747 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 C11orf57Q6ZUT1 292 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 CAMKMTQ7Z624 323 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 TMEM110Q86TL2 294 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 DHX40Q8IX18 779 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZNF366Q8N895 744 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 NCOA7Q8NI08 942 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ERP44Q9BS26 406 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 TRPV4Q9HBA0 871 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 EPB41L5Q9HCM4 733 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GPN1Q9HCN4 374 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZNF304Q9HCX3 659 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ATP13A1Q9HD20 1204 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 LTB4R2Q9NPC1 389 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PRDM6Q9NQX0 595 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 CENPMQ9NSP4 180 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 OGFRQ9NZT2 677 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ASH2LQ9UBL3 628 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 DRG1Q9Y295 367 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 RPH3AQ9Y2J0 694 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 PER2O15055 1255 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GLP2RO95838 553 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ALPPP05187 535 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 FTH1P19P0C7X4 201 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ALPPL2P10696 532 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 IL11P20809 199 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 NR2F2P24468 414 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ARL4AP40617 200 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ASMTP46597 345 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ALDH1A3P47895 512 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GTF2A1P52655 376 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 TLE1Q04724 770 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZNF628Q5EBL2 1059 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 AFMIDQ63HM1 303 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 RASAL3Q86YV0 1011 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 BATF2Q8N1L9 274 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 UXS1Q8NBZ7 420 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ZCCHC10Q8TBK6 192 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 SLC22A17Q8WUG5 538 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 MRGPRX1Q96LB2 322 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 C5orf34Q96MH7 638 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 KATNB1Q9BVA0 655 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 CPEB1Q9BZB8 566 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 SNX25Q9H3E2 840 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GSTO2Q9H4Y5 243 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 CARS2Q9HA77 564 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 HOMER3Q9NSC5 361 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PLA2G3Q9NZ20 509 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 KCMF1Q9P0J7 381 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 NESP48681 1621 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 NCF1BA6NI72 391 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 NCF1CA8MVU1 366 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 H0YIN7 160 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 FGF10O15520 208 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 SBK3P0C264 359 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 CALCBP10092 127 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 GABRB3P28472 473 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 KCNJ4P48050 445 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 C21orf58P58505 322 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ALKBH1Q13686 389 aaKnown RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 MXD4Q14582 209 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 MORF4L2Q15014 288 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 RPS6KA1Q15418 735 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 MAN2A1Q16706 1144 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ATAD3BQ5T9A4 648 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ARHGAP40Q5TG30 622 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 MSANTD1Q6ZTZ1 278 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 DENND5BQ6ZUT9 1274 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 TAS2R42Q7RTR8 314 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 PIK3C3Q8NEB9 887 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 OR56B2PQ8NGI1 322 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 TINAGL1Q9GZM7 467 aaPredicted RBP3.66□□□□□ -1.82
XRN1-202ENST00000392981 NYXQ9GZU5 481 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 TCP11L1Q9NUJ3 509 aa3.66□□□□□ -1.82
XRN1-202ENST00000392981 ANKMY1Q9P2S6 941 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms