RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 RSPH9Q9H1X1 276 aaPredicted RBP12.16□□□□□ -0.46
RFC4-202ENST00000392481 MTG2Q9H4K7 406 aa12.16□□□□□ -0.46
RFC4-202ENST00000392481 RETREG1Q9H6L5 497 aa12.16□□□□□ -0.46
RFC4-202ENST00000392481 DLL3Q9NYJ7 618 aa12.16□□□□□ -0.46
RFC4-202ENST00000392481 KNL1Q8NG31 2342 aa12.16□□□□□ -0.46
RFC4-202ENST00000392481 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
RFC4-202ENST00000392481 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 KHNYNO15037 678 aaKnown RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 CCP110O43303 1012 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 RNASEH1O60930 286 aaKnown RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 SIN3BO75182 1162 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 GYPCP04921 128 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 SERPING1P05155 500 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 DESP17661 470 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 ITPKAP23677 461 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 OR1E1P30953 314 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 KRT83P78385 493 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 PUM1Q14671 1186 aaKnown RBP eCLIP12.15□□□□□ -0.46
RFC4-202ENST00000392481 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 TDRD12Q587J7 1177 aaKnown RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 MANEALQ5VSG8 457 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 ZNF783Q6ZMS7 281 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 ARMCX6Q7L4S7 300 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 SLFN11Q7Z7L1 901 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 VPS36Q86VN1 386 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 CACUL1Q86Y37 369 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 SLC41A1Q8IVJ1 513 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 CCDC185Q8N715 623 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 FOXJ1Q92949 421 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 TRIM11Q96F44 468 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 C2orf49Q9BVC5 232 aaPredicted RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 ISCUQ9H1K1 167 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 SLC25A13Q9UJS0 675 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 PILRBQ9UKJ0 227 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 CDV3Q9UKY7 258 aaKnown RBP12.15□□□□□ -0.46
RFC4-202ENST00000392481 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
RFC4-202ENST00000392481 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.461e-6■□□□□ 9.9
RFC4-202ENST00000392481 NCOR2Q9Y618 2525 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
RFC4-202ENST00000392481 ATP9BO43861 1147 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 GDF9O60383 454 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 DNTTP04053 509 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 MYBL1P10243 752 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 RHOQP17081 205 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 NUMBP49757 651 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 AIF1P55008 147 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
RFC4-202ENST00000392481 SYCP2LQ5T4T6 812 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
RFC4-202ENST00000392481 TCEAL6Q6IPX3 200 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 SCYL2Q6P3W7 929 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 TMC6Q7Z403 805 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 DEFB119Q8N690 84 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 FRS2Q8WU20 508 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 TCEAL3Q969E4 200 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 PSMB7Q99436 277 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 GPR174Q9BXC1 333 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 PCED1AQ9H1Q7 454 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 TMEM74BQ9NUR3 256 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 EVLQ9UI08 416 aaPredicted RBP12.14□□□□□ -0.47
RFC4-202ENST00000392481 HS3ST2Q9Y278 367 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 DNAH14Q0VDD8 3507 aa12.14□□□□□ -0.47
RFC4-202ENST00000392481 A0A0D9SEW6 157 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 TMEM191CA6NGB0 347 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 FAM72CH0Y354 149 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
RFC4-202ENST00000392481 LRIG2O94898 1065 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
RFC4-202ENST00000392481 CASP14P31944 242 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 L1CAMP32004 1257 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 MAPKAPK2P49137 400 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 LIMK1P53667 647 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 OGDHQ02218 1023 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 ELAVL3Q14576 367 aaKnown RBP12.13□□□□□ -0.47
RFC4-202ENST00000392481 DLG2Q15700 870 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 CST6Q15828 149 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 EFHC2Q5JST6 749 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 WDR45BQ5MNZ6 344 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 FAM72AQ5TYM5 149 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 SPECC1LQ69YQ0 1117 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 FAM72DQ6L9T8 149 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 RWDD4Q6NW29 188 aaKnown RBP12.13□□□□□ -0.47
RFC4-202ENST00000392481 USP30Q70CQ3 517 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 RABEPKQ7Z6M1 372 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 FAM124AQ86V42 546 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 FAM72BQ86X60 149 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 DNAAF5Q86Y56 855 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
RFC4-202ENST00000392481 STK40Q8N2I9 435 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms