RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GIPC3Q8TF64 312 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 HSPH1Q92598 858 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SKA1Q96BD8 255 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SMARCD1Q96GM5 515 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 FMO2Q99518 471 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 PARVBQ9HBI1 364 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 CSNK1G1Q9HCP0 422 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 CYLDQ9NQC7 956 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 FNDC1Q4ZHG4 1894 aaPredicted RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 FUOMA2VDF0 154 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TRIM64CA6NLI5 447 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 YJEFN3A6XGL0 299 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TIMP1P01033 207 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 EN2P19622 333 aaPredicted RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 CRABP2P29373 138 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SDC4P31431 198 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TUFMP49411 452 aaKnown RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SYPL2Q5VXT5 272 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SCYL2Q6P3W7 929 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 SPOCD1Q6ZMY3 1216 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TAOK1Q7L7X3 1001 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 GRAMD1AQ96CP6 724 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 NEURL2Q9BR09 285 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 C11orf84Q9BUA3 381 aaPredicted RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 RBM38Q9H0Z9 239 aaKnown RBP19.42■□□□□ 0.7
CCDC50-202ENST00000392456 GPATCH2LQ9NWQ4 482 aa19.42■□□□□ 0.7
CCDC50-202ENST00000392456 TTC34A8MYJ7 566 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 FAM47E-STBD1D6RA91 191 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 FYNP06241 537 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 RAB41Q5JT25 222 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 RTP2Q5QGT7 225 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 ZNF449Q6P9G9 518 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 RCOR2Q8IZ40 523 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 DEFB106AQ8N104 65 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 SCAMP5Q8TAC9 235 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 SPATA18Q8TC71 538 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 MGARPQ8TDB4 240 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 PGLYRP2Q96PD5 576 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 MIPEPQ99797 713 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 PABPC3Q9H361 631 aaKnown RBP19.41■□□□□ 0.7
CCDC50-202ENST00000392456 WASF2Q9Y6W5 498 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 DPYSL4O14531 572 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 PHF2O75151 1096 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 CDKN2BP42772 138 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 SNX16P57768 344 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 TSPY1Q01534 308 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 CNGA3Q16281 694 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 IL23RQ5VWK5 629 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 POLNQ7Z5Q5 900 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 CROCCP2Q86T23 111 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 SIX6OS1Q8N1H7 587 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 COX4I2Q96KJ9 171 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 PHF12Q96QT6 1004 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 TMEM106CQ9BVX2 250 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 PLVAPQ9BX97 442 aa19.41■□□□□ 0.7
CCDC50-202ENST00000392456 STMN4Q9H169 189 aaPredicted RBP19.41■□□□□ 0.7
CCDC50-202ENST00000392456 RAG1P15918 1043 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 PTGIRP43119 386 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 SDHAF4Q5VUM1 108 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 FUT10Q6P4F1 479 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CCDC137Q6PK04 289 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 BHLHA9Q7RTU4 235 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TTC9BQ8N6N2 239 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 LRRC37BQ96QE4 947 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TBCBQ99426 244 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 LBHD1Q9BQE6 289 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TMEM109Q9BVC6 243 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TRIM31Q9BZY9 425 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CEP44Q9C0F1 390 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 SAE1Q9UBE0 346 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 FAF1Q9UNN5 650 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 DOLKQ9UPQ8 538 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 HOXA2O43364 376 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 KDELR1P24390 212 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 YWHAZP63104 245 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 MMRN1Q13201 1228 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 HNRNPDQ14103 355 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 ACAP1Q15027 740 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CYTH1Q15438 398 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CYP1B1Q16678 543 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CA9Q16790 459 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 HADHQ16836 314 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 KCTD21Q4G0X4 260 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 DCAF6Q58WW2 860 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 OTUD1Q5VV17 481 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 DENND2CQ68D51 928 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 VASH1Q7L8A9 365 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TOP1MTQ969P6 601 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 COLEC11Q9BWP8 271 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CADM1Q9BY67 442 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 CWH43Q9H720 699 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 ABI2Q9NYB9 513 aaPredicted RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 NAALADL1Q9UQQ1 740 aa19.4■□□□□ 0.7
CCDC50-202ENST00000392456 TMA7Q9Y2S6 64 aaKnown RBP19.4■□□□□ 0.7
CCDC50-202ENST00000392456 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 hCG_1818297A0A087WSY0 165 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 CBX6O95503 412 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 PCSK6P29122 969 aa19.39■□□□□ 0.69
CCDC50-202ENST00000392456 COILP38432 576 aaPredicted RBP19.39■□□□□ 0.69
CCDC50-202ENST00000392456 PGFP49763 221 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms