RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RPS6KB2Q9UBS0 482 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 BIN2Q9UBW5 565 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 IPO11Q9UI26 975 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SERTAD3Q9UJW9 196 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PLCL2Q9UPR0 1127 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 EXO1Q9UQ84 846 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 VDAC3Q9Y277 283 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 R3HDM2Q9Y2K5 976 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 C2CD2Q9Y426 696 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 USH2AO75445 5202 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 COL11A1P12107 1806 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 HRNRQ86YZ3 2850 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ABCA7Q8IZY2 2146 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PRAG1Q86YV5 1406 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 WDR81Q562E7 1941 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 USP31Q70CQ4 1352 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CREBBPQ92793 2442 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ASTN1O14525 1302 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A0U1RQS6 177 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A1W2PQH9 124 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ARHGAP10A1A4S6 786 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 C3orf70A6NLC5 250 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 B9A039 149 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TRIM49D1C9J1S8 452 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 USP17L23D6RBM5 183 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 AP4M1O00189 453 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PSMD9O00233 223 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CLIC1O00299 241 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CES2O00748 559 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PDXKO00764 312 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SOCS3O14543 225 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 RRHO14718 337 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ERC2O15083 957 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CLIC2O15247 247 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 HNRNPRO43390 633 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TMPRSS11DO60235 418 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GPR32O75388 356 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF324O75467 553 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CA11O75493 328 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TIPRLO75663 272 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PRPF6O94906 941 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SEC31AO94979 1220 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TNFRSF6BO95407 300 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 C22orf31O95567 290 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SNAI1O95863 264 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 C6orf47O95873 294 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CHEK2O96017 543 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 IGKV1-39P01597 117 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PRH1P02810 166 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ANXA1P04083 346 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 IGKV1D-39P04432 117 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CYP17A1P05093 508 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PFKMP08237 780 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 HOXD4P09016 255 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 UQCRFS1P1P0C7P4 283 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM157CP0CG43 387 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SRGAP2CP0DJJ0 459 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 IGHV4-30-4P0DP06 118 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CEACAM1P13688 526 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF14P17017 642 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ATF7P17544 494 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CHRNB2P17787 502 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 BCL3P20749 454 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNA3P22001 575 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GIFP27352 417 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CANXP27824 592 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CHATP28329 748 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 RBMS1P29558 406 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GKP32189 559 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CIITAP33076 1130 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CDH5P33151 784 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 FUSP35637 526 aaKnown RBP eCLIP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 MAP2K2P36507 400 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 HNF4AP41235 474 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GCLCP48506 637 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 DIO1P49895 249 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 MXI1P50539 228 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 METAP2P50579 478 aaKnown RBP eCLIP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PDE6CP51160 858 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 FUT6P51993 359 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 KIF11P52732 1056 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PMS2P54278 862 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PER3P56645 1201 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GSCP56915 257 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 BRWD1-AS2P59051 145 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 B3GALT5-AS1P59052 145 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SNRPD1P62314 119 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PPIAP62937 165 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PPP2R2AP63151 447 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 RPP30P78346 268 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV3-21P80748 117 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GUCY1A3Q02108 690 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 KIF23Q02241 960 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PPARDQ03181 441 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PAX8Q06710 450 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 IFRD2Q12894 506 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 UNC119Q13432 240 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 E2F2Q14209 437 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 HNF4GQ14541 408 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms