RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 CTSOP43234 321 aaPredicted RBP23.37■■□□□ 1.33
VLDLR-201ENST00000382096 NXPH1P58417 271 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 RTP5Q14D33 572 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 HES3Q5TGS1 186 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 SFMBT2Q5VUG0 894 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 FBXL19Q6PCT2 694 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 MMS22LQ6ZRQ5 1243 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
VLDLR-201ENST00000382096 CCDC117Q8IWD4 279 aaPredicted RBP23.37■■□□□ 1.33
VLDLR-201ENST00000382096 CFAP52Q8N1V2 620 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 SERAC1Q96JX3 654 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 SLC2A13Q96QE2 648 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 PRMT1Q99873 361 aaKnown RBP23.37■■□□□ 1.33
VLDLR-201ENST00000382096 ERVMER34-1Q9H9K5 563 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 SIX2Q9NPC8 291 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 TJP2Q9UDY2 1190 aa23.37■■□□□ 1.33
VLDLR-201ENST00000382096 KCNU1A8MYU2 1149 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 LATO43561 262 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 TACR2P21452 398 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 C5AR1P21730 350 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 RXRGP48443 463 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 PSMD8P48556 350 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 PITX1P78337 314 aaPredicted RBP23.36■■□□□ 1.33
VLDLR-201ENST00000382096 ECT2LQ008S8 904 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 TARDBPQ13148 414 aaKnown RBP eCLIP23.36■■□□□ 1.33
VLDLR-201ENST00000382096 TAF5Q15542 800 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 ARHGAP44Q17R89 818 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 LGI2Q8N0V4 545 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 OXR1Q8N573 874 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 CPXM1Q96SM3 734 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 PRORYQ9H606 182 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.36■■□□□ 1.33
VLDLR-201ENST00000382096 SLCO3A1Q9UIG8 710 aa23.36■■□□□ 1.33
VLDLR-201ENST00000382096 TLR4O00206 839 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 MOCS3O95396 460 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 SEMG2Q02383 582 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 ILKQ13418 452 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 SLC45A4Q5BKX6 768 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 RAP1GAP2Q684P5 730 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 KANSL1Q7Z3B3 1105 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 CREBRFQ8IUR6 639 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 OR14C36Q8NHC7 312 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 PTPRN2Q92932 1015 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 PPP1R13BQ96KQ4 1090 aa23.35■■□□□ 1.33
VLDLR-201ENST00000382096 ATXN7O15265 892 aaPredicted RBP23.34■■□□□ 1.33
VLDLR-201ENST00000382096 HSF2BPO75031 334 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 SLC2A3P11169 496 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 MZF1P28698 734 aaPredicted RBP23.34■■□□□ 1.33
VLDLR-201ENST00000382096 USP8P40818 1118 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 PPP2CBP62714 309 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 PPP2CAP67775 309 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 C19orf57Q0VDD7 668 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 ELAVL3Q14576 367 aaKnown RBP23.34■■□□□ 1.33
VLDLR-201ENST00000382096 NAPEPLDQ6IQ20 393 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 LRRC69Q6ZNQ3 347 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 CHSY1Q86X52 802 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 STK40Q8N2I9 435 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 ATP6V0D2Q8N8Y2 350 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 SNIP1Q8TAD8 396 aaKnown RBP23.34■■□□□ 1.33
VLDLR-201ENST00000382096 FAM131CQ96AQ9 280 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 AJAP1Q9UKB5 411 aaPredicted RBP23.34■■□□□ 1.33
VLDLR-201ENST00000382096 CEP83Q9Y592 693 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 AK5Q9Y6K8 562 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 TENM4Q6N022 2769 aa23.34■■□□□ 1.33
VLDLR-201ENST00000382096 F5H5T6 163 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 RRP8O43159 456 aaKnown RBP23.33■■□□□ 1.33
VLDLR-201ENST00000382096 C1QL1O75973 258 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 PRB1P04280 392 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 DRD3P35462 400 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 MTIF2P46199 727 aaKnown RBP23.33■■□□□ 1.33
VLDLR-201ENST00000382096 CDK17Q00537 523 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 PTK2Q05397 1052 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 BNIP3Q12983 259 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 SLC12A1Q13621 1099 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 MAN2A1Q16706 1144 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 EFHC1Q5JVL4 640 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 TTC39BQ5VTQ0 682 aaPredicted RBP23.33■■□□□ 1.33
VLDLR-201ENST00000382096 RNF219Q5W0B1 726 aaPredicted RBP23.33■■□□□ 1.33
VLDLR-201ENST00000382096 DPY19L2P1Q6NXN4 242 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 APCDD1Q8J025 514 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 DEFB106AQ8N104 65 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 CACTIN-AS1Q8N1I8 211 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 MFSD2AQ8NA29 543 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 SLC39A7Q92504 469 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 RPL10LQ96L21 214 aaKnown RBP23.33■■□□□ 1.33
VLDLR-201ENST00000382096 CLSTN2Q9H4D0 955 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 CHMP5Q9NZZ3 219 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 SLC12A6Q9UHW9 1150 aa23.33■■□□□ 1.33
VLDLR-201ENST00000382096 CCR1P32246 355 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 CLCN1P35523 988 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 PLK1P53350 603 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 OLFML1Q6UWY5 402 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 C11orf57Q6ZUT1 292 aaPredicted RBP23.32■■□□□ 1.32
VLDLR-201ENST00000382096 IQCHQ86VS3 1027 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 SPATS2Q86XZ4 545 aaKnown RBP23.32■■□□□ 1.32
VLDLR-201ENST00000382096 LSM14AQ8ND56 463 aaKnown RBP23.32■■□□□ 1.32
VLDLR-201ENST00000382096 RFFLQ8WZ73 363 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 BAP1Q92560 729 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 NOX5Q96PH1 765 aa23.32■■□□□ 1.32
VLDLR-201ENST00000382096 KDM4CQ9H3R0 1056 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms