RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPAIN-202ENST00000381208 SLCO3A1Q9UIG8 710 aa13.37□□□□□ -0.27
RPAIN-202ENST00000381208 KLK13Q9UKR3 277 aa13.37□□□□□ -0.27
RPAIN-202ENST00000381208 SYNJ2BP-COX16A0A087WUM0 186 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 FAM47DPA6NHR8 397 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 M0QYT0 321 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 ATP9BO43861 1147 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 GRAP2O75791 330 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 IL1BP01584 269 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 ERBB2P04626 1255 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 IGHV4-34P06331 123 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 CTSKP43235 329 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 GABRB2P47870 512 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 PSMD8P48556 350 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 CDH4P55283 916 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 PITX1P78337 314 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 KRT83P78385 493 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 NME3Q13232 169 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 CXorf57Q6NSI4 855 aaKnown RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 STK40Q8N2I9 435 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 BAHD1Q8TBE0 780 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 RPL10LQ96L21 214 aaKnown RBP13.36□□□□□ -0.27
RPAIN-202ENST00000381208 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 FEM1AQ9BSK4 669 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 MTG2Q9H4K7 406 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 WDCPQ9H6R7 721 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 IL21RQ9HBE5 538 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 COX16Q9P0S2 106 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D30Q9Y2I9 924 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 DAAM1Q9Y4D1 1078 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 SNX11Q9Y5W9 270 aa13.36□□□□□ -0.27
RPAIN-202ENST00000381208 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 PES1O00541 588 aaKnown RBP13.35□□□□□ -0.27
RPAIN-202ENST00000381208 MAGEC1O60732 1142 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 PAGE1O75459 146 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 TPM2P07951 284 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 CYP11B1P15538 503 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 APBA1Q02410 837 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 RAPGEF1Q13905 1077 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 DRAP1Q14919 205 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-202ENST00000381208 DPCR1Q3MIW9 517 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 SLC25A52Q3SY17 297 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 KLHDC7AQ5VTJ3 777 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 LRRC31Q6UY01 552 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ARCQ7LC44 396 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 OXR1Q8N573 874 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 OR14C36Q8NHC7 312 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ZCCHC14Q8WYQ9 949 aaKnown RBP13.35□□□□□ -0.27
RPAIN-202ENST00000381208 C1orf74Q96LT6 269 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 NPY6RQ99463 290 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ORAI3Q9BRQ5 295 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-202ENST00000381208 STK33Q9BYT3 514 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 ARHGEF38Q9NXL2 777 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 VANGL2Q9ULK5 521 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 HS3ST4Q9Y661 456 aa13.35□□□□□ -0.27
RPAIN-202ENST00000381208 C10orf142B7Z368 130 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 TNFSF14O43557 240 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 CDK4P11802 303 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 UCHL3P15374 230 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 CD38P28907 300 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 CXCR3P49682 368 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 ADPRHP54922 357 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 OVGP1Q12889 678 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 KCNJ12Q14500 433 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 MIIPQ5JXC2 388 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 SETD3Q86TU7 594 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-202ENST00000381208 PRPF39Q86UA1 669 aaKnown RBP13.34□□□□□ -0.27
RPAIN-202ENST00000381208 GALNT15Q8N3T1 639 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 FRS2Q8WU20 508 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 ALG14Q96F25 216 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 ELF4Q99607 663 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-202ENST00000381208 TKTL2Q9H0I9 626 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 PLCB1Q9NQ66 1216 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 GDF3Q9NR23 364 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
RPAIN-202ENST00000381208 SERGEFQ9UGK8 458 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 DMTF1Q9Y222 760 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 HS3ST2Q9Y278 367 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 CHD6Q8TD26 2715 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 KNTC1P50748 2209 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 FRYQ5TBA9 3013 aa13.34□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3IA0A087WXS9 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3EA0A087X179 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3KA0A087X1G2 549 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 A0A1B0GTQ1 180 aa13.33□□□□□ -0.27
RPAIN-202ENST00000381208 TBC1D3FA6NER0 549 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms