RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZNF614Q8N883 585 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 RDH11Q8TC12 318 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 GPR20Q99678 358 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 SH3GL3Q99963 347 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 TKTL2Q9H0I9 626 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 SEMA6BQ9H3T3 888 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 FANCFQ9NPI8 374 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 A0A0A0MRY4 1105 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 ACSL4O60488 711 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 AKAP5P24588 427 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 ICAM3P32942 547 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 POLD2P49005 469 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 RFTN2Q52LD8 501 aaPredicted RBP7.29□□□□□ -1.24
CCDC171-201ENST00000380701 LUZP2Q86TE4 346 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 ACMSDQ8TDX5 336 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 SPATA13Q96N96 652 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 CORO1BQ9BR76 489 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 ZC4H2Q9NQZ6 224 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 FER1L4A9Z1Z3 1794 aa7.29□□□□□ -1.24
CCDC171-201ENST00000380701 RNF103O00237 685 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PDE9AO76083 593 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 KRT75O95678 551 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BDNFP23560 247 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RHBDL3P58872 404 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 NT5DC1Q5TFE4 455 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 TRAPPC5Q8IUR0 188 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 B3GALNT2Q8NCR0 500 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 HASPINQ8TF76 798 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CASKIN2Q8WXE0 1202 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 INPP4AQ96PE3 977 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SLC25A23Q9BV35 468 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 POLMQ9NP87 494 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 FAM105AQ9NUU6 356 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SOHLH2Q9NX45 425 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ATP6V1HQ9UI12 483 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ST3GAL5Q9UNP4 418 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 POLR1DQ9Y2S0 133 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 FAM86B1E9PN63 330 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 H3BM21 787 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ATMINO43313 823 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 FAM86B2P0C5J1 330 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SERPINB3P29508 390 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 TALDO1P37837 337 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 C1orf186Q6ZWK4 172 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MICU2Q8IYU8 434 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 GPR135Q8IZ08 494 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PROX1Q92786 737 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BHMTQ93088 406 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ERP27Q96DN0 273 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PPP3R2Q96LZ3 170 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SAMD11Q96NU1 681 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DEFB118Q96PH6 123 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 WDR24Q96S15 920 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ACO2Q99798 780 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CCNT2O60583 730 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RECQL5O94762 991 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 GLRA2P23416 452 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RPA3P35244 121 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MLH1P40692 756 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RPS7P62081 194 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 TERF2Q15554 542 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PARP15Q460N3 678 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CBWD6Q4V339 395 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 EPC2Q52LR7 807 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 WDR48Q8TAF3 677 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ZSCAN18Q8TBC5 510 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PTCD2Q8WV60 388 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 THOC1Q96FV9 657 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MAGED4Q96JG8 741 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DEPDC7Q96QD5 511 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 EXOSC4Q9NPD3 245 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 STMN3Q9NZ72 180 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 IL1RAPL1Q9NZN1 696 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PCDHB9Q9Y5E1 797 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PCDHA2Q9Y5H9 948 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 TAF6LQ9Y6J9 622 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CALB2P22676 271 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CASP4P49662 377 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BOP1Q14137 746 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CSHL1Q14406 222 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BMT2Q1RMZ1 405 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 STXBP5Q5T5C0 1151 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 NEPROQ6NW34 567 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 POTEHQ6S545 545 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 KDM7AQ6ZMT4 941 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 NPAS4Q8IUM7 802 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SMG7Q92540 1137 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 EDEM1Q92611 657 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CCT8L2Q96SF2 557 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CDT1Q9H211 546 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DDX4Q9NQI0 724 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 IL17RBQ9NRM6 502 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 OR12D3Q9UGF7 316 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms