RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RTN2O75298 545 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 DRD3P35462 400 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 ACADVLP49748 655 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 CDK17Q00537 523 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 TARDBPQ13148 414 aaKnown RBP eCLIP23.8■■□□□ 1.4
U2AF1-202ENST00000380276 ITPR1Q14643 2758 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 TTC39BQ5VTQ0 682 aaPredicted RBP23.8■■□□□ 1.4
U2AF1-202ENST00000380276 CREBRFQ8IUR6 639 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 STK32AQ8WU08 396 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 ZNF606Q8WXB4 792 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 BBC3Q96PG8 261 aaPredicted RBP23.8■■□□□ 1.4
U2AF1-202ENST00000380276 ACP6Q9NPH0 428 aa23.8■■□□□ 1.4
U2AF1-202ENST00000380276 ACACAQ13085 2346 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 C1QTNF3-AMACRE9PGA6 284 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 SDC3O75056 442 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 C1SP09871 688 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 CDK4P11802 303 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 OXCT1P55809 520 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 CENPCQ03188 943 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 PDCLQ13371 301 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 TAF5Q15542 800 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 FAM46CQ5VWP2 391 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 LRRC69Q6ZNQ3 347 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 TRIM59Q8IWR1 403 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 DEFB106AQ8N104 65 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 MFSD2AQ8NA29 543 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 APC2O95996 2303 aa23.79■■□□□ 1.4
U2AF1-202ENST00000380276 GNA14O95837 355 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 IGLV3-25P01717 112 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 SLC2A3P11169 496 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 CCR1P32246 355 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 NME3Q13232 169 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 STAT4Q14765 748 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 ARHGAP44Q17R89 818 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 TMEM110Q86TL2 294 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 PPP1R9BQ96SB3 815 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 PRMT1Q99873 361 aaKnown RBP23.78■■□□□ 1.4
U2AF1-202ENST00000380276 SRRTQ9BXP5 876 aaKnown RBP23.78■■□□□ 1.4
U2AF1-202ENST00000380276 VANGL2Q9ULK5 521 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 CNTN6Q9UQ52 1028 aa23.78■■□□□ 1.4
U2AF1-202ENST00000380276 PPP1R3GB7ZBB8 358 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 LATO43561 262 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 MAGEC1O60732 1142 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 GRAP2O75791 330 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 GGCXP38435 758 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 PAK1Q13153 545 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 CXorf57Q6NSI4 855 aaKnown RBP23.77■■□□□ 1.4
U2AF1-202ENST00000380276 FBXL22Q6P050 247 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 GJB7Q6PEY0 223 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 Q6ZVU0 165 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 SPATS2Q86XZ4 545 aaKnown RBP23.77■■□□□ 1.4
U2AF1-202ENST00000380276 PASD1Q8IV76 773 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 FRS2Q8WU20 508 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 MYOCQ99972 504 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 KDM4CQ9H3R0 1056 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 ERVMER34-1Q9H9K5 563 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 VPS28Q9UK41 221 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 SARDHQ9UL12 918 aa23.77■■□□□ 1.4
U2AF1-202ENST00000380276 URB1O60287 2271 aaKnown RBP23.76■■□□□ 1.39
U2AF1-202ENST00000380276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-202ENST00000380276 SLC7A4O43246 635 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 PLRG1O43660 514 aaKnown RBP23.76■■□□□ 1.39
U2AF1-202ENST00000380276 ITPKBP27987 946 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 PLK1P53350 603 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 CNTN1Q12860 1018 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 ZNF177Q13360 481 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-202ENST00000380276 DLG2Q15700 870 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 MEA1Q16626 185 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 CRACR2AQ9BSW2 395 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 DMTF1Q9Y222 760 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 CA5BQ9Y2D0 317 aa23.76■■□□□ 1.39
U2AF1-202ENST00000380276 RRP8O43159 456 aaKnown RBP23.75■■□□□ 1.39
U2AF1-202ENST00000380276 RXRGP48443 463 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 SETMARQ53H47 684 aaPredicted RBP23.75■■□□□ 1.39
U2AF1-202ENST00000380276 OR6B2Q6IFH4 312 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 FBXL19Q6PCT2 694 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 TSC1Q92574 1164 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 MUC3BQ9H195 1237 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 ARHGAP20Q9P2F6 1191 aa23.75■■□□□ 1.39
U2AF1-202ENST00000380276 C10orf142B7Z368 130 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 TLX3O43711 291 aaPredicted RBP23.74■■□□□ 1.39
U2AF1-202ENST00000380276 HSF2BPO75031 334 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 CKMT2P17540 419 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 BMP6P22004 513 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 NUDT1P36639 197 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 IRAK1P51617 712 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 DAB2P98082 770 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 AUHQ13825 339 aaKnown RBP23.74■■□□□ 1.39
U2AF1-202ENST00000380276 HS1BP3Q53T59 392 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 EFHC1Q5JVL4 640 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 AGBL4Q5VU57 503 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 ENOSF1Q7L5Y1 443 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 IQCHQ86VS3 1027 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 TRIM69Q86WT6 500 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 OR52K2Q8NGK3 314 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 KLK6Q92876 244 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 KLHDC7BQ96G42 594 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 PPP1R13BQ96KQ4 1090 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 CPXM1Q96SM3 734 aa23.74■■□□□ 1.39
U2AF1-202ENST00000380276 FEM1AQ9BSK4 669 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms