RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 OTOP3Q7RTS5 596 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ALYREFQ86V81 257 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 RASSF3Q86WH2 238 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 METTL23Q86XA0 190 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF280BQ86YH2 543 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SMC1BQ8NDV3 1235 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 USP33Q8TEY7 942 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SKA1Q96BD8 255 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 HDAC11Q96DB2 347 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 MFSD3Q96ES6 412 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CERS2Q96G23 380 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 EPAS1Q99814 870 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 TBC1D10AQ9BXI6 508 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF358Q9NW07 568 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 VANGL2Q9ULK5 521 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 FRMPD3Q5JV73 1810 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ATP9BO43861 1147 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 DDHD2O94830 711 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 IGLV3-25P01717 112 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 POLBP06746 335 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 TM4SF4P48230 202 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 RAB27AP51159 221 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 NKX3-2P78367 333 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 TRIM71Q2Q1W2 868 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ARTNQ5T4W7 220 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 N4BP2L1Q5TBK1 243 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 RWDD4Q6NW29 188 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 PDZD4Q76G19 769 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CMC1Q7Z7K0 106 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ARID3BQ8IVW6 561 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CNTD1Q8N815 330 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 DNAAF3Q8N9W5 541 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 IRGQQ8WZA9 623 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CDKL2Q92772 493 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CASP10Q92851 521 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 APBB2Q92870 758 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF669Q96BR6 464 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 GBA3Q9H227 469 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CASS4Q9NQ75 786 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CHRAC1Q9NRG0 131 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 RRN3Q9NYV6 651 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZFATQ9P243 1243 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ARMCX1Q9P291 453 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 COLQQ9Y215 455 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ZCWPW2A0A1B0GU75 182 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 CCDC78A2IDD5 438 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ARHGAP42A6NI28 874 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 GOLGA8TH3BQL2 631 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 NCAM2O15394 837 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ITM2AO43736 263 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ATP5HO75947 161 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 IL1BP01584 269 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC5A3P53794 718 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SREBF2Q12772 1141 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 ITGA7Q13683 1181 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SDHAF4Q5VUM1 108 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 DCLRE1AQ6PJP8 1040 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 SPATA22Q8NHS9 363 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 MAGEC3Q8TD91 643 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 TEKT5Q96M29 485 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 C7orf26Q96N11 449 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 MIPEPQ99797 713 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 RNF186Q9NXI6 227 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 PRKAG2Q9UGJ0 569 aa8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-204ENST00000380176 VWA8A3KMH1 1905 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 DFFAO00273 331 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TNFRSF10BO14763 440 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 SNNO75324 88 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 PAGE1O75459 146 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 LYPLA1O75608 230 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 CNTFP26441 200 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 GRIK1P39086 918 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 PGGT1BP53609 377 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 RPL10AP62906 217 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 PDE1BQ01064 536 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 MBTPS1Q14703 1052 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 FASTKD1Q53R41 847 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 HSP90AA5PQ58FG0 334 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 SPANXN3Q5MJ09 141 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 SCD5Q86SK9 330 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TMEM135Q86UB9 458 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 LONP2Q86WA8 852 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 CCNJLQ8IV13 435 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ACVR1CQ8NER5 493 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 INPP5DQ92835 1189 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 PTCD3Q96EY7 689 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 SUSD3Q96L08 255 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 NAT9Q9BTE0 207 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 NMUR2Q9GZQ4 415 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 NMUR1Q9HB89 426 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 OSER1Q9NX31 292 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TMEM216Q9P0N5 145 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 NOD1Q9Y239 953 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 MTO1Q9Y2Z2 717 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms