RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 LIPMQ5VYY2 423 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SPPL2AQ8TCT8 520 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ATG4CQ96DT6 458 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF317Q96PQ6 595 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PPP1R10Q96QC0 940 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 WDR18Q9BV38 432 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SPATA16Q9BXB7 569 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TRIM39Q9HCM9 518 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SETD1AO15047 1707 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CCDC88CQ9P219 2028 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TECPR2O15040 1411 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CNOT3O75175 753 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SIN3BO75182 1162 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RTN3O95197 1032 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CYP1A2P05177 515 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PAEPP09466 180 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 HNRNPLP14866 589 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TTKP33981 857 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RECQLP46063 649 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 JAM2P57087 298 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF554Q86TJ5 538 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZDHHC17Q8IUH5 632 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 LRRC57Q8N9N7 239 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF540Q8NDQ6 660 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PSMA8Q8TAA3 256 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ABHD8Q96I13 439 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TKTL2Q9H0I9 626 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ABCB10Q9NRK6 738 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PIM2Q9P1W9 311 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RAD54BQ9Y620 910 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ANKRD36CQ5JPF3 1778 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CCNT2O60583 730 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SLURP2P0DP57 97 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 MYL4P12829 197 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PEX2P28328 305 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 IL12RB1P42701 662 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ARMCX6Q7L4S7 300 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 APOBEC3FQ8IUX4 373 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 NAT14Q8WUY8 206 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RCN3Q96D15 328 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 COX4I2Q96KJ9 171 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 POLR1BQ9H9Y6 1135 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 COPG2Q9UBF2 871 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF70Q9UC06 446 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DRG1Q9Y295 367 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 hCG_1818297A0A087WSY0 165 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ST13P50502 369 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 BACE1P56817 501 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 NAA20P61599 178 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 USP46P62068 366 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 GTF2BQ00403 316 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RSBN1Q5VWQ0 802 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 NETO2Q8NC67 525 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 OR52K1Q8NGK4 314 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 HTRA1Q92743 480 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TUBGCP5Q96RT8 1024 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ACOX2Q99424 681 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DEFB129Q9H1M3 183 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CPSF4O95639 269 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PGAM1P18669 254 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 AKAP5P24588 427 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RPS6KA3P51812 740 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PPM1JQ5JR12 505 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DGKKQ5KSL6 1271 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CMC1Q7Z7K0 106 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 PSTKQ8IV42 348 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 MAP4K3Q8IVH8 894 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SNX31Q8N9S9 440 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 FBXO30Q8TB52 745 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DEPDC7Q96QD5 511 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SYT15Q9BQS2 421 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZFYVE28Q9HCC9 887 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TPRKBQ9Y3C4 175 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DGKBQ9Y6T7 804 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 AKAP11Q9UKA4 1901 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DUOX1Q9NRD9 1551 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF197O14709 1029 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 FAM20BO75063 409 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ATG7O95352 703 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RBP1P09455 135 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 RPL14P50914 215 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SCNN1BP51168 640 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 NOMO3P69849 1222 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CTBP1Q13363 440 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 MFSD4BQ5TF39 518 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ARHGAP17Q68EM7 881 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 OLFML1Q6UWY5 402 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZFPM1Q8IX07 1006 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ZNF781Q8N8C0 355 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 OMA1Q96E52 524 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 DDX4Q9NQI0 724 aaKnown RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SNX15Q9NRS6 342 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 SNTG2Q9NY99 539 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 TIMM13Q9Y5L4 95 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CHI3L1P36222 383 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-201ENST00000380152 MGAT5BQ3V5L5 792 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ANO7Q6IWH7 933 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ADGRD1Q6QNK2 874 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 ADGRF2Q8IZF7 708 aa4.26□□□□□ -1.73
BRCA2-201ENST00000380152 CYP4X1Q8N118 509 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms