RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 GJB3O75712 270 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 GNA14O95837 355 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CTSLP07711 333 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ANP32AP39687 249 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 GALCP54803 685 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MARSP56192 900 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 KRT31Q15323 416 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MAN2A1Q16706 1144 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 HNRNPA1L2Q32P51 320 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SYCP2LQ5T4T6 812 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 KLHDC7AQ5VTJ3 777 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 RWDD4Q6NW29 188 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CRTC1Q6UUV9 634 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FAM217AQ8IXS0 508 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 C1orf216Q8TAB5 229 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FIBINQ8TAL6 211 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 LRRN4Q8WUT4 740 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FUBP1Q96AE4 644 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 LMLNQ96KR4 655 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 NOX5Q96PH1 765 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CDK5RAP1Q96SZ6 601 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PCDHB18PQ96TA0 734 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TRIM7Q9C029 511 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 LHX5Q9H2C1 402 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 GGT7Q9UJ14 662 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 KIAA1257Q9ULG3 409 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ITM2BQ9Y287 266 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ANKRD6Q9Y2G4 727 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF510Q9Y2H8 683 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FCF1Q9Y324 198 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PCDHB9Q9Y5E1 797 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TTC24A2A3L6 582 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 F8VZ95 297 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TEX33O43247 280 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PRKCGP05129 697 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FTH1P19P0C7X4 201 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CEACAM1P13688 526 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 GNSP15586 552 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SDHBP21912 280 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 OR1E1P30953 314 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CCR1P32246 355 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 DRD3P35462 400 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ACVRL1P37023 503 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MCCD1P59942 119 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 RPL7AP62424 266 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ENPP2Q13822 863 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SYCP1Q15431 976 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PREPLQ4J6C6 727 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SCYL2Q6P3W7 929 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ERICH1Q86X53 443 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 NAXDQ8IW45 347 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FAM71AQ8IYT1 594 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TTC39CQ8N584 583 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CCDC185Q8N715 623 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MLKLQ8NB16 471 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 HJURPQ8NCD3 748 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 HNRNPLLQ8WVV9 542 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SERAC1Q96JX3 654 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 BTN2A3PQ96KV6 586 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 DNAI2Q9GZS0 605 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TAS2R14Q9NYV8 317 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 STOML2Q9UJZ1 356 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 WASF3Q9UPY6 502 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CNTN6Q9UQ52 1028 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 A0A0U1RQS6 177 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TYW5A2RUC4 315 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 FFAR2O15552 330 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MED7O43513 233 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PAK4O96013 591 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 AFF3P51826 1226 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 CDK17Q00537 523 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 DEUP1Q05D60 604 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 SEL1L3Q68CR1 1132 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 MSANTD2Q6P1R3 559 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 XYLT1Q86Y38 959 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TP53INP2Q8IXH6 220 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 RYBPQ8N488 228 aaPredicted RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 EPS8L1Q8TE68 723 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 C18orf8Q96DM3 657 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 PRMT1Q99873 361 aaKnown RBP4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ORAI3Q9BRQ5 295 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 GPATCH2LQ9NWQ4 482 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 TMEM63CQ9P1W3 806 aa4.8□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 P4HA2O15460 535 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 FBXO21O94952 628 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 IGLV3-25P01717 112 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CHRNB2P17787 502 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 CDK11BP21127 795 aaKnown RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 RFC1P35251 1148 aaPredicted RBP4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ADPRHP54922 357 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 UBXN1Q04323 297 aa4.79□□□□□ -1.64
C9orf72-203ENST00000380003 ZNF177Q13360 481 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms