RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 INTS6LQ5JSJ4 861 aaKnown RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 SLC9A4Q6AI14 798 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 TADA2BQ86TJ2 420 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 CIR1Q86X95 450 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 NPY6RQ99463 290 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 A0A1W2PQH9 124 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 TRDMT1O14717 391 aaKnown RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 DNAJB2P25686 324 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 PTPN7P35236 360 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 MGAT3Q09327 533 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 ARL13BQ3SXY8 428 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 NOMO2Q5JPE7 1267 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 MFSD5Q6N075 450 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 OTOP3Q7RTS5 596 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 TMEM173Q86WV6 379 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 SPATA22Q8NHS9 363 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 DQX1Q8TE96 717 aaKnown RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 MAML1Q92585 1016 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 AZIN2Q96A70 460 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 SPDL1Q96EA4 605 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 C1orf74Q96LT6 269 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 CYTH2Q99418 400 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 NELL2Q99435 816 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 RNF208Q9H0X6 261 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 NDFIP2Q9NV92 336 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 GRID1Q9ULK0 1009 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 DPYSL4O14531 572 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 LPXNO60711 386 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 DAB1O75553 588 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 ENDOD1O94919 500 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 SLC4A1P02730 911 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 IL9RQ01113 521 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 EML3Q32P44 896 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 PRSS55Q6UWB4 352 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 ZNF567Q8N184 647 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 KIF2BQ8N4N8 673 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 LRRC8CQ8TDW0 803 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 ZNF75CPQ92670 426 aaPredicted RBP11.06□□□□□ -0.64
NEDD9-201ENST00000379433 CASP10Q92851 521 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 GPR62Q9BZJ7 368 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 NMUR1Q9HB89 426 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
NEDD9-201ENST00000379433 MT-CYBP00156 380 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 CCNCP24863 283 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 ETFBP38117 255 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 USP46P62068 366 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 KCNJ11Q14654 390 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SH2D4BQ5SQS7 431 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 UNC5AQ6ZN44 842 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SLC24A5Q71RS6 500 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 STRADAQ7RTN6 431 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 TMEM86AQ8N2M4 240 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 TEKT4Q8WW24 435 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 UNC93B1Q9H1C4 597 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 NPHS2Q9NP85 383 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 A0A0G2JND7 137 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 A6NNZ2 444 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 PMPCBO75439 489 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 HOXC8P31273 242 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 VEGFBP49765 207 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 TAZQ16635 292 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 TUBB8Q3ZCM7 444 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 C16orf46Q6P387 395 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 ZCCHC23Q6ZST2 131 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 CROCCP2Q86T23 111 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 FAM9CQ8IZT9 166 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 LINC01599Q8WXQ3 324 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 PABPC5Q96DU9 382 aaKnown RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 ZNF395Q9H8N7 513 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SMYD2Q9NRG4 433 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 PCDHB7Q9Y5E2 793 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
NEDD9-201ENST00000379433 CSH1P0DML2 217 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 CSH2P0DML3 217 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 ENDOUP21128 410 aaKnown RBP11.04□□□□□ -0.64
NEDD9-201ENST00000379433 CYP2C18P33260 490 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 ERFP50548 548 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 MAXP61244 160 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 DUSP4Q13115 394 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 CERCAMQ5T4B2 595 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 LRRC6Q86X45 466 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 IPMKQ8NFU5 416 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 URGCPQ8TCY9 931 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 AGR3Q8TD06 166 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 WDR6Q9NNW5 1121 aaKnown RBP11.04□□□□□ -0.64
NEDD9-201ENST00000379433 CNGB3Q9NQW8 809 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 TXNDC16Q9P2K2 825 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 STK38LQ9Y2H1 464 aa11.04□□□□□ -0.64
NEDD9-201ENST00000379433 PRUNE2Q8WUY3 3088 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms