RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CDO1Q16878 200 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 ARL13BQ3SXY8 428 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 C6orf118Q5T5N4 469 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 PHLDB2Q86SQ0 1253 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 FAM131BQ86XD5 332 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 EMC1Q8N766 993 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 OR8D1Q8WZ84 308 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 PTPRN2Q92932 1015 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 BIRC7Q96CA5 298 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 C1orf74Q96LT6 269 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 C2orf49Q9BVC5 232 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 ANLNQ9NQW6 1124 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 FZD4Q9ULV1 537 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 TBC1D30Q9Y2I9 924 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 SNX10Q9Y5X0 201 aa25.34■■□□□ 1.65
TNFRSF4-201ENST00000379236 E9PAM4 449 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 CHRNB2P17787 502 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 C5AR1P21730 350 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 PMLP29590 882 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 SLC14A1Q13336 389 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 NCAPHQ15003 741 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 ALFQ53S48 1182 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 KIAA0895LQ68EN5 471 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 CAVIN1Q6NZI2 390 aaKnown RBP25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 ADAT2Q7Z6V5 191 aaKnown RBP25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 SETD3Q86TU7 594 aaPredicted RBP25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 CNTNAP3BQ96NU0 1288 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 HAPLN3Q96S86 360 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 SELENOOQ9BVL4 669 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 CNTNAP3Q9BZ76 1288 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 ADAM22Q9P0K1 906 aa25.33■■□□□ 1.65
TNFRSF4-201ENST00000379236 LRRC10BA6NIK2 292 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 UPK3BL1B0FP48 263 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 UPK3BL2E5RIL1 263 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 BNIP3LO60238 219 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 CALB1P05937 261 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 FOXC1Q12948 553 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 FILIP1LQ4L180 1135 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 TRNP1Q6NT89 227 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 TFAP2DQ7Z6R9 452 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 OR52K2Q8NGK3 314 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 CCDC114Q96M63 670 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 NEUROG2Q9H2A3 272 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 TMPRSS4Q9NRS4 437 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 MPP6Q9NZW5 540 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 FARP1Q9Y4F1 1045 aaPredicted RBP25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 PCDHB9Q9Y5E1 797 aa25.32■■□□□ 1.64
TNFRSF4-201ENST00000379236 C1QTNF3-AMACRE9PGA6 284 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 VAV1P15498 845 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 GOT1P17174 413 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 CD27P26842 260 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 OR1E1P30953 314 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 VASPP50552 380 aaPredicted RBP25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 DLG2Q15700 870 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 CLEC16AQ2KHT3 1053 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 FAM46CQ5VWP2 391 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 ATP11CQ8NB49 1132 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 OR2T34Q8NGX1 318 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 RXFP2Q8WXD0 754 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 ALG14Q96F25 216 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 FAM129BQ96TA1 746 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 BPIFA3Q9BQP9 254 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 GAREM1Q9H706 876 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 SERGEFQ9UGK8 458 aa25.31■■□□□ 1.64
TNFRSF4-201ENST00000379236 A0A1B0GVT2 93 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 ANKRD62A6NC57 917 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 ATP9BO43861 1147 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 KRT3P12035 628 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 UNGP13051 313 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 ATP1A3P13637 1013 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 FERP16591 822 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 CSNK1EP49674 416 aaKnown RBP25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 GALCP54803 685 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 HNRNPDQ14103 355 aaKnown RBP25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 NCEH1Q6PIU2 408 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 SH2D3CQ8N5H7 860 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 OR14C36Q8NHC7 312 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 AGPAT1Q99943 283 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 ZYG11BQ9C0D3 744 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 TM9SF3Q9HD45 589 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 ADAMTS1Q9UHI8 967 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 OR51B4Q9Y5P0 310 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 PCNX2A6NKB5 2137 aa25.3■■□□□ 1.64
TNFRSF4-201ENST00000379236 DRGXA6NNA5 263 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 I6L893 689 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 C15orf59Q2T9L4 293 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 Q6ZVU0 165 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 BNIPLQ7Z465 357 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 PIP4P1Q86T03 277 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 ZNF683Q8IZ20 524 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 AADATQ8N5Z0 425 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 FRS2Q8WU20 508 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 PCDHB18PQ96TA0 734 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 HSD3B7Q9H2F3 369 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 OSGEPQ9NPF4 335 aa25.29■■□□□ 1.64
TNFRSF4-201ENST00000379236 IGLV3-10A0A075B6K4 115 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 ALOX15BO15296 676 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 CD59P13987 128 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 DESP17661 470 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 GRIA4P48058 902 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms