RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 NME5P56597 212 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 KCNQ4P56696 695 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PFKPQ01813 784 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PLOD1Q02809 727 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PTK2BQ14289 1009 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PSMD5Q16401 504 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SLC9B1Q4ZJI4 515 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FAM45BPQ6NSW5 357 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SWSAP1Q6NVH7 229 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PRMT9Q6P2P2 845 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CAMK1DQ8IU85 385 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PCDH19Q8TAB3 1148 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FAM45AQ8TCE6 357 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 GIPC3Q8TF64 312 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 TRUB1Q8WWH5 349 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 RXFP2Q8WXD0 754 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SLC35B4Q969S0 331 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ELMO3Q96BJ8 720 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ISOC1Q96CN7 298 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM176AQ96HP8 235 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM79Q9BSE2 394 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 UPF3AQ9H1J1 476 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 LRRC40Q9H9A6 602 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SNX15Q9NRS6 342 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 NRBP2Q9NSY0 501 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CYTH4Q9UIA0 394 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CTDP1Q9Y5B0 961 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SCN9AQ15858 1988 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 LRRIQ4A6NIV6 560 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ADCY6O43306 1168 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 KLHL41O60662 606 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 RNASEH2AO75792 299 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MICAL2O94851 1124 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 VAPBO95292 243 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SLURP2P0DP57 97 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 CYP2C8P10632 490 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 FCGR1AP12314 374 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SSTR3P32745 418 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ICAM3P32942 547 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 GLUD2P49448 558 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 BCAP31P51572 246 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ACTR2P61160 394 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SNX17Q15036 470 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SAMD4BQ5PRF9 694 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 LCLAT1Q6UWP7 414 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 CCDC80Q76M96 950 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF781Q8N8C0 355 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 LEMD2Q8NC56 503 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 NSUN6Q8TEA1 469 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TFAP2CQ92754 450 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 EFHD2Q96C19 240 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 HSPBAP1Q96EW2 488 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 CERS2Q96G23 380 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MAELQ96JY0 434 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TCF12Q99081 682 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MMP19Q99542 508 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 C1orf50Q9BV19 199 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 EIF2AQ9BY44 585 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SNX25Q9H3E2 840 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TDRD3Q9H7E2 651 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 COQ6Q9Y2Z9 468 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 hCG_2014768A0A024R1R8 64 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 HEATR9A2RTY3 570 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 AQP12BA6NM10 295 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 C9IYK1 514 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 HTRA2O43464 458 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 CILPO75339 1184 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TRPA1O75762 1119 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 DGKIO75912 1065 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SORBS2O94875 1100 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 METTL18O95568 372 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 NR3C2P08235 984 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SDC4P31431 198 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 CSRP3P50461 194 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 TMBIM6P55061 237 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 C21orf59P57076 290 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MPP1Q00013 466 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 SQLEQ14534 574 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 LSM12Q3MHD2 195 aaKnown RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 NHSL2Q5HYW2 709 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 IER5Q5VY09 327 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB8OSQ8IWT0 167 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 AQP12AQ8IXF9 295 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 EMC1Q8N766 993 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 ANKRD52Q8NB46 1076 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 RCN3Q96D15 328 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 THAP11Q96EK4 314 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 FAM167AQ96KS9 214 aa8.36□□□□□ -1.07
PTPRR-203ENST00000378778 OXCT2Q9BYC2 517 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-203ENST00000378778 MTMR12Q9C0I1 747 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms