RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RC3H2Q9HBD1 1191 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 XAB2Q9HCS7 855 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 NOP53Q9NZM5 478 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 IGSF9Q9P2J2 1179 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 AFF4Q9UHB7 1163 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 SLC24A2Q9UI40 661 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 MYO16Q9Y6X6 1858 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 MTSS1O43312 755 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 DIAPH2O60879 1101 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 PIAS1O75925 651 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 ASMTLO95671 621 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 ZDHHC11BP0C7U3 371 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 MAGEA3P43357 314 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 NRG1Q02297 640 aaPredicted RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 TRABD2AQ86V40 505 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 GRAMD1AQ96CP6 724 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 UBE2OQ9C0C9 1292 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 PPCSQ9HAB8 311 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 MPP6Q9NZW5 540 aa19.87■□□□□ 0.77
SSU72-204ENST00000378726 MRPL42Q9Y6G3 142 aaKnown RBP19.87■□□□□ 0.77
SSU72-204ENST00000378726 NUP205Q92621 2012 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 DFFAO00273 331 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 EFCAB14O75071 495 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 SEC24AO95486 1093 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 APOEP02649 317 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 LBX1P52954 281 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 COG7P83436 770 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 DSG1Q02413 1049 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 CCDC15Q0P6D6 951 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 DNAJC3Q13217 504 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 CRYMQ14894 314 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 NAA25Q14CX7 972 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 TRIP4Q15650 581 aaPredicted RBP19.86■□□□□ 0.77
SSU72-204ENST00000378726 LZTR1Q8N653 840 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 ATP6V0D2Q8N8Y2 350 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 LRRC39Q96DD0 335 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 CFAP36Q96G28 342 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 SIGLEC10Q96LC7 697 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 TTLL2Q9BWV7 592 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 MYLK2Q9H1R3 596 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 CCSER2Q9H7U1 834 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 KIF9Q9HAQ2 790 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 NDFIP2Q9NV92 336 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 ZC3H7BQ9UGR2 993 aaKnown RBP19.86■□□□□ 0.77
SSU72-204ENST00000378726 PLXNA3P51805 1871 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 SLC12A8A0AV02 714 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 ZBTB24O43167 697 aaPredicted RBP19.86■□□□□ 0.77
SSU72-204ENST00000378726 TLR5O60602 858 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 ABLIM3O94929 683 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 UNC5CO95185 931 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 HMBSP08397 361 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 KLHL38Q2WGJ6 581 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 TEX44Q53QW1 395 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 OTOP2Q7RTS6 562 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 CMTR2Q8IYT2 770 aaKnown RBP19.86■□□□□ 0.77
SSU72-204ENST00000378726 DENND1AQ8TEH3 1009 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 UTP4Q969X6 686 aaKnown RBP19.86■□□□□ 0.77
SSU72-204ENST00000378726 ZNF570Q96NI8 536 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 AGAP3Q96P47 875 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 TMEM106CQ9BVX2 250 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 SPG21Q9NZD8 308 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 FETUBQ9UGM5 382 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 GRID1Q9ULK0 1009 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 VANGL2Q9ULK5 521 aa19.86■□□□□ 0.77
SSU72-204ENST00000378726 MYO18AQ92614 2054 aaKnown RBP19.85■□□□□ 0.77
SSU72-204ENST00000378726 TCRBV9S1A1TA0A576 114 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 SPAG6O75602 509 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 LAG3P18627 525 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 SKIV2L2P42285 1042 aaKnown RBP19.85■□□□□ 0.77
SSU72-204ENST00000378726 EFTUD2Q15029 972 aaKnown RBP eCLIP19.85■□□□□ 0.773e-6■■■■■ 41.9
SSU72-204ENST00000378726 ARHGAP12Q8IWW6 846 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 CEP295NLQ96MC4 621 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 CYTH2Q99418 400 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 SLC39A8Q9C0K1 460 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 EIF2B3Q9NR50 452 aaKnown RBP19.85■□□□□ 0.77
SSU72-204ENST00000378726 TRHDEQ9UKU6 1024 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 MAD1L1Q9Y6D9 718 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 COL4A6Q14031 1691 aa19.85■□□□□ 0.77
SSU72-204ENST00000378726 JCHAINP01591 159 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 ZBTB17Q13105 803 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 RASA2Q15283 850 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 MS4A13Q5J8X5 152 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 ARHGAP36Q6ZRI8 547 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 MPP5Q8N3R9 675 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 RTL3Q8N8U3 475 aaKnown RBP19.84■□□□□ 0.77
SSU72-204ENST00000378726 BTN2A3PQ96KV6 586 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 YME1L1Q96TA2 773 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 VAT1Q99536 393 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 EBNA1BP2Q99848 306 aaKnown RBP19.84■□□□□ 0.77
SSU72-204ENST00000378726 CYP4F11Q9HBI6 524 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 SLCO1B3Q9NPD5 702 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 PSMC3IPQ9P2W1 217 aaPredicted RBP19.84■□□□□ 0.77
SSU72-204ENST00000378726 PHTF1Q9UMS5 762 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 MLNP12872 115 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 CCNCP24863 283 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 ZNF33AQ06730 810 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 NR1H3Q13133 447 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 TPGS2Q68CL5 300 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 LRRC8BQ6P9F7 803 aa19.84■□□□□ 0.77
SSU72-204ENST00000378726 ZSCAN18Q8TBC5 510 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms