RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LRIG2O94898 1065 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 PTPN7P35236 360 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 CA9Q16790 459 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 C15orf39Q6ZRI6 1047 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 ACSS3Q9H6R3 686 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 LRRC4CQ9HCJ2 640 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
SHROOM1-203ENST00000378679 CKBP12277 381 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 RPL17P18621 184 aaKnown RBP14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 TKTP29401 623 aaKnown RBP14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 CD86P42081 329 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 OGDHQ02218 1023 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 ITGA9Q13797 1035 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 NEPROQ6NW34 567 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM154Q6P9G4 183 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC30A9Q6PML9 568 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 CLEC20AQ6ZU45 233 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 EXOC3L1Q86VI1 746 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 MFN1Q8IWA4 741 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 CPT1BQ92523 772 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 CORO1BQ9BR76 489 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 DPP7Q9UHL4 492 aa14.46□□□□□ -0.1
SHROOM1-203ENST00000378679 VPS26AO75436 327 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 STBD1O95210 358 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 HSPA8P11142 646 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 AIF1P55008 147 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 TRIM32Q13049 653 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SYPL2Q5VXT5 272 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 UNC5AQ6ZN44 842 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 TAC4Q86UU9 113 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 NPAS4Q8IUM7 802 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SEMA3CQ99985 751 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SPG21Q9NZD8 308 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 RCOR3Q9P2K3 495 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 TCRBV9S1A1TA0A576 114 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 MAP3K7O43318 606 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 ABHD2P08910 425 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 UBTFL6P0CB48 400 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 C12orf50Q8NA57 414 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 CEP70Q8NHQ1 597 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 APOPT1Q96IL0 206 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 EXOC2Q96KP1 924 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 AGO3Q9H9G7 860 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 DNAJC16Q9Y2G8 782 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 KCNA4P22459 653 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 CTNNB1P35222 781 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 PPM1AP35813 382 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SATB1Q01826 763 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 QPCTQ16769 361 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 AARS2Q5JTZ9 985 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 C16orf46Q6P387 395 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 ISLR2Q6UXK2 745 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 NECAB2Q7Z6G3 386 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SPATA24Q86W54 205 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 CFAP52Q8N1V2 620 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 CMASQ8NFW8 434 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 SH3KBP1Q96B97 665 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 B3GALT6Q96L58 329 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 KLHL5Q96PQ7 755 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 RHOBTB2Q9BYZ6 727 aa14.45□□□□□ -0.1
SHROOM1-203ENST00000378679 MYADML2A6NDP7 307 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 AGPSO00116 658 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GSTA4O15217 222 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 TYMPP19971 482 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 MAP4P27816 1152 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 RPA3P35244 121 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GLUD2P49448 558 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SERPINH1P50454 418 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 PDCD2Q16342 344 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC35F5Q8WV83 523 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 CERS2Q96G23 380 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 CLPBQ9H078 707 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 UTP6Q9NYH9 597 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SLC25A13Q9UJS0 675 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ZNF197O14709 1029 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 PHGDHO43175 533 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ATP6V1G2O95670 118 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 IQCF3P0C7M6 154 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ITGALP20701 1170 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 AQP5P55064 265 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 INCA1Q0VD86 236 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 FASTKD3Q14CZ7 662 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 GRTP1Q5TC63 336 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 TMEM40Q8WWA1 233 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 TM6SF2Q9BZW4 377 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ADAMTS10Q9H324 1103 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 RNF186Q9NXI6 227 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 PLA2G4CQ9UP65 541 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 TLL2Q9Y6L7 1015 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SYN3O14994 580 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 SOAT2O75908 522 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 KLHL2O95198 593 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 CXCL14O95715 111 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 PIRTP0C851 137 aa14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 ENO3P13929 434 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-203ENST00000378679 CCDC149Q6ZUS6 474 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms