RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 E9PAM4 449 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 DDX3XO00571 662 aaKnown RBP eCLIP17.48■□□□□ 0.397e-7■■■■□ 23.1
RER1-202ENST00000378512 AP5Z1O43299 807 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 GYPCP04921 128 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 SPINK2P20155 84 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 GPD1P21695 349 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 TPMTP51580 245 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF143P52747 638 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 RPL7AP62424 266 aaKnown RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 SULT2A1Q06520 285 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF33AQ06730 810 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 SCAPQ12770 1279 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF177Q13360 481 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 NFKBIBQ15653 356 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 DAB2IPQ5VWQ8 1189 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 PLEKHA7Q6IQ23 1121 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 SETD3Q86TU7 594 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 DEFB124Q8NES8 71 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 SIPA1Q96FS4 1042 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF419Q96HQ0 510 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 HSPA12BQ96MM6 686 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 PPP1R9BQ96SB3 815 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 OSBPL2Q9H1P3 480 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 RSPH9Q9H1X1 276 aaPredicted RBP17.48■□□□□ 0.39
RER1-202ENST00000378512 RETREG1Q9H6L5 497 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 NEU3Q9UQ49 428 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 SNX10Q9Y5X0 201 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 PCDH15Q96QU1 1955 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 CACNA1BQ00975 2339 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 TARSL2A2RTX5 802 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 ZBED6P86452 979 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ZBTB16Q05516 673 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 NUMA1Q14980 2115 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 CDO1Q16878 200 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 C9orf64Q5T6V5 341 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 DNAJC24Q6P3W2 148 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 SLC23A3Q6PIS1 610 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 CACUL1Q86Y37 369 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 NUSAP1Q9BXS6 441 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 ISCUQ9H1K1 167 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 SLCO3A1Q9UIG8 710 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 BZW2Q9Y6E2 419 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 CEP295Q9C0D2 2601 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 MAOBP27338 520 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 CD6P30203 668 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 HOXD12P35452 270 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ST8SIA6P61647 398 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 RPS14P62263 151 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 MAMLD1Q13495 774 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ST3GAL2Q16842 350 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ARL13BQ3SXY8 428 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 LRRC31Q6UY01 552 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 FRS2Q8WU20 508 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 MCEEQ96PE7 176 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 PSMB7Q99436 277 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 CNPY3Q9BT09 278 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 GTPBP2Q9BX10 602 aaKnown RBP17.47■□□□□ 0.39
RER1-202ENST00000378512 TSPY26PQ9H489 355 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 MTG2Q9H4K7 406 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 CAPN10Q9HC96 672 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 OR12D3Q9UGF7 316 aa17.47■□□□□ 0.39
RER1-202ENST00000378512 ASCC3Q8N3C0 2202 aaKnown RBP17.46■□□□□ 0.39
RER1-202ENST00000378512 ASPMQ8IZT6 3477 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 CACNA1EQ15878 2313 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 CCP110O43303 1012 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 ATP9BO43861 1147 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 SIN3BO75182 1162 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 RTN2O75298 545 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 SKILP12757 684 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 OXTRP30559 389 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 HNRNPH3P31942 346 aaKnown RBP17.46■□□□□ 0.39
RER1-202ENST00000378512 DPP6P42658 865 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 STK19P49842 368 aaPredicted RBP17.46■□□□□ 0.39
RER1-202ENST00000378512 AIF1P55008 147 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 SHC2P98077 582 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 OGDHQ02218 1023 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 FOXC1Q12948 553 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 ZNF783Q6ZMS7 281 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 CCDC185Q8N715 623 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 RPL10LQ96L21 214 aaKnown RBP17.46■□□□□ 0.39
RER1-202ENST00000378512 ZYG11BQ9C0D3 744 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 PARVAQ9NVD7 372 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 MPP6Q9NZW5 540 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 SCML1Q9UN30 329 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 WASF3Q9UPY6 502 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 HS3ST2Q9Y278 367 aa17.46■□□□□ 0.39
RER1-202ENST00000378512 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
RER1-202ENST00000378512 C10orf142B7Z368 130 aa17.45■□□□□ 0.38
RER1-202ENST00000378512 FAM72CH0Y354 149 aa17.45■□□□□ 0.38
RER1-202ENST00000378512 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
RER1-202ENST00000378512 FAM72AQ5TYM5 149 aa17.45■□□□□ 0.38
RER1-202ENST00000378512 RNF219Q5W0B1 726 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms