RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GIMAP4Q9NUV9 329 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 UBA2Q9UBT2 640 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 SLC25A13Q9UJS0 675 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 NUDT5Q9UKK9 219 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 PNMA8BQ9ULN7 279 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 RIPK3Q9Y572 518 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 A0A1W2PPM1 405 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 TCRBV7S2A1N4TA0A589 114 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 SYNCRIPO60506 623 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 ITGA2BP08514 1039 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 BEX3Q00994 111 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 NOMO1Q15155 1222 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DLG3Q92796 817 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 LGMNQ99538 433 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DHX33Q9H6R0 707 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 COMMD8Q9NX08 183 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 DLG5Q8TDM6 1919 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 CLUHO75153 1309 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 MGAT4DA6NG13 374 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 SAC3D1A6NKF1 404 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 YDJCA8MPS7 323 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 ATP5F1P24539 256 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 HSDL1Q3SXM5 330 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 PPP1R26Q5T8A7 1209 aaPredicted RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 MON1BQ7L1V2 547 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
RPGR-203ENST00000378505 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 FNDC5Q8NAU1 212 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 CPXM1Q96SM3 734 aa11.48□□□□□ -0.57
RPGR-203ENST00000378505 PSMD12O00232 456 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 LDLRP01130 860 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 ALOX15P16050 662 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 HALP42357 657 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 DEFA1P59665 94 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 DEFA3P59666 94 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 NR1H4Q96RI1 486 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 MAF1Q9H063 256 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 GEMIN8Q9NWZ8 242 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 PTCH2Q9Y6C5 1203 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 HDAC3O15379 428 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 LZTS3O60299 673 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 SHOX2O60902 331 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 MTA2O94776 668 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 TNFAIP8O95379 198 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 LTA4HP09960 611 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 SMIM10L2AP0DMW4 78 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 SMIM10L2BP0DMW5 78 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 CCNB1P14635 433 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 TKTP29401 623 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 RAP1GDS1P52306 607 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 QPCTQ16769 361 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 NIFKQ9BYG3 293 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 STN1Q9H668 368 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 H2AFY2Q9P0M6 372 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 CRYL1Q9Y2S2 319 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 LRCH4O75427 683 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 WDR47O94967 919 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 ARIH2O95376 493 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 PAX3P23760 479 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 HPCAP84074 193 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 SLC20A2Q08357 652 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 WASHC5Q12768 1159 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 KCTD19Q17RG1 926 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 ASTE1Q2TB18 679 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 GJC2Q5T442 439 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 STRADAQ7RTN6 431 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 NMD3Q96D46 503 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 ZBTB10Q96DT7 871 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 WDR41Q9HAD4 459 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 CDV3Q9UKY7 258 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 FMN2Q9NZ56 1722 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 M0R2N6 131 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 AGPSO00116 658 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 CCNT2O60583 730 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 CLCN5P51795 746 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 MRPS5P82675 430 aaKnown RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 LBX2Q6XYB7 198 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 NET1Q7Z628 596 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 ITIH5Q86UX2 942 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
RPGR-203ENST00000378505 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 UCMAQ8WVF2 138 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 SEPHS2Q99611 448 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 SMPD4Q9NXE4 827 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 NOCTQ9UK39 431 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms