RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 AIM2O14862 343 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CCNB1P14635 433 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SERPINB5P36952 375 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MPP1Q00013 466 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 BFSP2Q13515 415 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MORF4L2Q15014 288 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 POLD3Q15054 466 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 RTP2Q5QGT7 225 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MARC1Q5VT66 337 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 FUT10Q6P4F1 479 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 KDM7AQ6ZMT4 941 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SYT11Q9BT88 431 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CNOT10Q9H9A5 744 aaKnown RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 HPS4Q9NQG7 708 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ADAM28Q9UKQ2 775 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CCDC160A6NGH7 325 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SDR42E2A6NKP2 422 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 E5RI56 91 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 F5H5T6 163 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TRIM16O95361 564 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SNRPAP09012 282 aaKnown RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 GABRR2P28476 465 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 PCK1P35558 622 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ACVRL1P37023 503 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SLC11A1P49279 550 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 AQP5P55064 265 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 DAOAP59103 153 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 PTP4A2Q12974 167 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 DDX39BQ13838 428 aaKnown RBP8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SLC25A52Q3SY17 297 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SLC45A4Q5BKX6 768 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CRLF3Q8IUI8 442 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 CD101Q93033 1021 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 TTC25Q96NG3 672 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 MANSC1Q9H8J5 431 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 ARHGEF38Q9NXL2 777 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SH3BP1Q9Y3L3 701 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 SPAG17Q6Q759 2223 aa8.28□□□□□ -1.08
CKAP2-203ENST00000378037 XPO1O14980 1071 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 TPST1O60507 370 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GJB5O95377 273 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 LRG1P02750 347 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 AMHP03971 560 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PDHA1P08559 390 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 CSH1P0DML2 217 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 CSH2P0DML3 217 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 HNRNPLP14866 589 aaKnown RBP eCLIP8.27□□□□□ -1.098e-7■■■■□ 23.9
CKAP2-203ENST00000378037 SERPINB3P29508 390 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 L1CAMP32004 1257 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SEMA5AQ13591 1074 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PDK2Q15119 407 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ALFQ53S48 1182 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 MORN1Q5T089 497 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 FAM43BQ6ZT52 329 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 BZW1Q7L1Q6 419 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SLC41A1Q8IVJ1 513 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ZCCHC9Q8N567 271 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PQLC3Q8N755 202 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 C12orf76Q8N812 135 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GSDMBQ8TAX9 411 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SLC22A17Q8WUG5 538 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 TMA16Q96EY4 203 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 EGFL8Q99944 293 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 UXTQ9UBK9 157 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SLC2A6Q9UGQ3 507 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 KIAA1257Q9ULG3 409 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PLA2G4CQ9UP65 541 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 AK5Q9Y6K8 562 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SZT2Q5T011 3432 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 A0A0D9SEW6 157 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 A0A0U1RQF3 1178 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GYG2O15488 501 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 FAM189A1O60320 539 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SNAP91O60641 907 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SUPT7LO94864 414 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PFKMP08237 780 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 VAV1P15498 845 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 MX2P20592 715 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GLDCP23378 1020 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PIK3CGP48736 1102 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PSEN1P49768 467 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 BTKQ06187 659 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 INTS6LQ5JSJ4 861 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ATXN7L2Q5T6C5 722 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 TRPM8Q7Z2W7 1104 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 NPWQ8N729 165 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 THTPAQ9BU02 230 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 BCO2Q9BYV7 579 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms