RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TFEBP19484 476 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 GP5P40197 560 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 RELAQ04206 551 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 PDK2Q15119 407 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 CCDC153Q494R4 210 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 GPR107Q5VW38 600 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 FSTL4Q6MZW2 842 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 ZBTB49Q6ZSB9 765 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 ANKRD36BP1Q96IX9 119 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 SCYL1Q96KG9 808 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 PNPLA3Q9NST1 481 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 RNF146Q9NTX7 359 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 TBCCD1Q9NVR7 557 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 COQ6Q9Y2Z9 468 aa16.18■□□□□ 0.18
CKAP4-201ENST00000378026 J3QRK9 145 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 MATN2O00339 956 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 GCATO75600 419 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ALDH1A2O94788 518 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CLIC3O95833 236 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 PIGRP01833 764 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 HOXC6P09630 235 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 GRIA4P48058 902 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 RPL14P50914 215 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SP2Q02086 613 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TGFBIQ15582 683 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 BOLA3Q53S33 107 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 C16orf87Q6PH81 154 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CARM1Q86X55 608 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TMEM126BQ8IUX1 230 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 LZTR1Q8N653 840 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 FBXL8Q96CD0 374 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CLK4Q9HAZ1 481 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 NMRAL1Q9HBL8 299 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SFMBT1Q9UHJ3 866 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 A0A1W2PPW3 197 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 KPNA7A9QM74 516 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 E7ENX8 843 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZBTB11O95625 1053 aaPredicted RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 AVPR1AP37288 418 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TXNL4AP83876 142 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 INSCQ1MX18 579 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ILDR2Q71H61 639 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CCNYL1Q8N7R7 359 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SREK1Q8WXA9 508 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF669Q96BR6 464 aaPredicted RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TMEM176AQ96HP8 235 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ABHD8Q96I13 439 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 COX4I2Q96KJ9 171 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF597Q96LX8 424 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 B3GNT5Q9BYG0 378 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 GMPR2Q9P2T1 348 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CDYLQ9Y232 598 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TPST1O60507 370 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CXCL8P10145 99 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 MCF2P10911 925 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SDC4P31431 198 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ARL2P36404 184 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 AP3M2P53677 418 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 TTC33Q6PID6 262 aaPredicted RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SPATA6LQ8N4H0 392 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 LPGAT1Q92604 370 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 CERS2Q96G23 380 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 SLC38A7Q9NVC3 462 aa16.17■□□□□ 0.18
CKAP4-201ENST00000378026 COPG1Q9Y678 874 aaKnown RBP16.17■□□□□ 0.18
CKAP4-201ENST00000378026 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 KANSL1LA0AUZ9 987 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 FBP2O00757 339 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 PAPSS1O43252 624 aaPredicted RBP16.16■□□□□ 0.18
CKAP4-201ENST00000378026 HTRA2O43464 458 aaPredicted RBP16.16■□□□□ 0.18
CKAP4-201ENST00000378026 ITGB3P05106 788 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 C2P06681 752 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 PGAM1P18669 254 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 CD247P20963 164 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 PSMB4P28070 264 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 PSME3P61289 254 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 BNIP3Q12983 259 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 SEMA5AQ13591 1074 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 GLRA4Q5JXX5 417 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 FAM219BQ5XKK7 198 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 GPR180Q86V85 440 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 PYROXD2Q8N2H3 581 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF839A8K0R7 811 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 TRIM38O00635 465 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 OGTO15294 1046 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 GRID2O43424 1007 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 AKAP10O43572 662 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 C21orf59P57076 290 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 SUPT20HL1Q3ZLR7 823 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 DCAF6Q58WW2 860 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms