RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 THTPAQ9BU02 230 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ARVCFO00192 962 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 GNGT2O14610 69 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 SOAT2O75908 522 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 STBD1O95210 358 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ENO3P13929 434 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-202ENST00000377797 TSHRP16473 764 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ITGALP20701 1170 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 TKTP29401 623 aaKnown RBP14.79□□□□□ -0.04
TCOF1-202ENST00000377797 PCID2Q5JVF3 399 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 C17orf99Q6UX52 265 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 CMASQ8NFW8 434 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-202ENST00000377797 KCNV2Q8TDN2 545 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 SLC26A7Q8TE54 656 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ZNF75CPQ92670 426 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-202ENST00000377797 SEMA3CQ99985 751 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 CLPBQ9H078 707 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ACTL7BQ9Y614 415 aa14.79□□□□□ -0.04
TCOF1-202ENST00000377797 ZNF197O14709 1029 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 AIM2O14862 343 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SCAMP5Q8TAC9 235 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 GDAP2Q9NXN4 497 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 BCLAF3A2AJT9 711 aaKnown RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SYN3O14994 580 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 PPM1AP35813 382 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 C16orf46Q6P387 395 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SLC35F5Q8WV83 523 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SH3KBP1Q96B97 665 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 PTPN18Q99952 460 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 CACYBPQ9HB71 228 aaKnown RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 NDE1Q9NXR1 346 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 ADGRA2Q96PE1 1338 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 UBOX5O94941 541 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 RBP1P09455 135 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 FASTKD3Q14CZ7 662 aaKnown RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 TTLL9Q3SXZ7 439 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 DNAL1Q4LDG9 190 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SCARA3Q6AZY7 606 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 UGT3A1Q6NUS8 523 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 DRICH1Q6PGQ1 229 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-202ENST00000377797 CCDC149Q6ZUS6 474 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 CCDC126Q96EE4 140 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 SPG21Q9NZD8 308 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 ARAP2Q8WZ64 1704 aa14.78□□□□□ -0.04
TCOF1-202ENST00000377797 GLUD2P49448 558 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 TEX44Q53QW1 395 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 ANKRD22Q5VYY1 191 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 SNX19Q92543 992 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 ADAMTS10Q9H324 1103 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 SYTL2Q9HCH5 934 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 NCKIPSDQ9NZQ3 722 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 STK25O00506 426 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 PHGDHO43175 533 aaKnown RBP14.77□□□□□ -0.04
TCOF1-202ENST00000377797 LUC7L3O95232 432 aaKnown RBP14.77□□□□□ -0.04
TCOF1-202ENST00000377797 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.04
TCOF1-202ENST00000377797 GNRH1P01148 92 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 PBX3P40426 434 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 GTF2H3Q13889 308 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 RNASEH2BQ5TBB1 312 aaKnown RBP14.77□□□□□ -0.04
TCOF1-202ENST00000377797 FOXR1Q6PIV2 292 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 MTDHQ86UE4 582 aaKnown RBP14.77□□□□□ -0.04
TCOF1-202ENST00000377797 KLHL5Q96PQ7 755 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 CORO1BQ9BR76 489 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 RNF112Q9ULX5 631 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 COL4A1P02462 1669 aa14.77□□□□□ -0.04
TCOF1-202ENST00000377797 MPOP05164 745 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 ANGPTL8Q6UXH0 198 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 RGS9BPQ6ZS82 235 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 OTOP2Q7RTS6 562 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-202ENST00000377797 CKAP2Q8WWK9 683 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 BTN2A3PQ96KV6 586 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 FOPNLQ96NB1 174 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 RHOBTB2Q9BYZ6 727 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 HAO1Q9UJM8 370 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 TMEM59LQ9UK28 342 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 PCDHA11Q9Y5I1 949 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 RAD54BQ9Y620 910 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 SPATA31D3P0C874 917 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 POU4F1Q01851 419 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 ZCCHC23Q6ZST2 131 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 SPATA31D4Q6ZUB0 917 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 C2orf49Q9BVC5 232 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-202ENST00000377797 MRPL40Q9NQ50 206 aaKnown RBP14.77□□□□□ -0.05
TCOF1-202ENST00000377797 KAT6AQ92794 2004 aa14.77□□□□□ -0.05
TCOF1-202ENST00000377797 XYLBO75191 536 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 L1CAMP32004 1257 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 CTNNB1P35222 781 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 NAB1Q13506 487 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 TBCCQ15814 346 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 GLT6D1Q7Z4J2 308 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 CFAP52Q8N1V2 620 aa14.76□□□□□ -0.05
TCOF1-202ENST00000377797 EXOC2Q96KP1 924 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms