RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FGF10O15520 208 aaPredicted RBP20.65■□□□□ 0.9
VSX1-202ENST00000376709 T-ENOLP0DO92 83 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 MYL2P10916 166 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 SERPINB3P29508 390 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 TYK2P29597 1187 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 ZNF33AQ06730 810 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 DSC1Q08554 894 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 SWT1Q5T5J6 900 aaKnown RBP20.65■□□□□ 0.9
VSX1-202ENST00000376709 GRTP1Q5TC63 336 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 NAPEPLDQ6IQ20 393 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 DCP1BQ8IZD4 617 aaKnown RBP20.65■□□□□ 0.9
VSX1-202ENST00000376709 SLC43A3Q8NBI5 491 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 PPP1R14CQ8TAE6 165 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 INPP5DQ92835 1189 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 TBC1D31Q96DN5 1066 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 IL22Q9GZX6 179 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 DCDC2Q9UHG0 476 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
VSX1-202ENST00000376709 FAM237BA0A1B0GVD1 139 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 A0A1W2PQH9 124 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 MAGEB16A2A368 324 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 MOCS2O96007 188 aaPredicted RBP20.64■□□□□ 0.89
VSX1-202ENST00000376709 NPY2RP49146 381 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 GTF2A1P52655 376 aaPredicted RBP20.64■□□□□ 0.89
VSX1-202ENST00000376709 ANKRD20A4Q4UJ75 823 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 STXBP5Q5T5C0 1151 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 N4BP2L1Q5TBK1 243 aaPredicted RBP20.64■□□□□ 0.89
VSX1-202ENST00000376709 C16orf46Q6P387 395 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 ARHGAP36Q6ZRI8 547 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 CEP57Q86XR8 500 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 MFSD3Q96ES6 412 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 FAM193BQ96PV7 902 aaPredicted RBP20.64■□□□□ 0.89
VSX1-202ENST00000376709 NMUR1Q9HB89 426 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 SAR1AQ9NR31 198 aa20.64■□□□□ 0.89
VSX1-202ENST00000376709 HAUS5O94927 633 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 CCNCP24863 283 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 HTR7P34969 479 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 CDH17Q12864 832 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 PPP2R5DQ14738 602 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 OTOP3Q7RTS5 596 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 STRA8Q7Z7C7 330 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 CRLF3Q8IUI8 442 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ARID3BQ8IVW6 561 aaPredicted RBP20.63■□□□□ 0.89
VSX1-202ENST00000376709 COLGALT2Q8IYK4 626 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ZSCAN18Q8TBC5 510 aaPredicted RBP20.63■□□□□ 0.89
VSX1-202ENST00000376709 DPF3Q92784 378 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ATXN7L3BQ96GX2 97 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ZCWPW1Q9H0M4 648 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 FBXO6Q9NRD1 293 aaPredicted RBP20.63■□□□□ 0.89
VSX1-202ENST00000376709 TBC1D13Q9NVG8 400 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ZCWPW2A0A1B0GU75 182 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 C2orf71A6NGG8 1288 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 OAZ2O95190 189 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 TPH1P17752 444 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 SLC8A1P32418 973 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 OCRLQ01968 901 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 E2F5Q15329 346 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 FASTKD1Q53R41 847 aaKnown RBP20.63■□□□□ 0.89
VSX1-202ENST00000376709 CES4AQ5XG92 561 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 ZCCHC23Q6ZST2 131 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 LINC00523Q86TU6 105 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 LZTR1Q8N653 840 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 CNTD1Q8N815 330 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 SKA1Q96BD8 255 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 SERPINB11Q96P15 392 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 RBBP8Q99708 897 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 CHRAC1Q9NRG0 131 aa20.63■□□□□ 0.89
VSX1-202ENST00000376709 AAR2Q9Y312 384 aaKnown RBP20.63■□□□□ 0.89
VSX1-202ENST00000376709 AP3B1O00203 1094 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 SPRP35270 261 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 STX3Q13277 289 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 CTC1Q2NKJ3 1217 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 HSP90AA5PQ58FG0 334 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 SDHAF4Q5VUM1 108 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 ARHGAP12Q8IWW6 846 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 MAGEC3Q8TD91 643 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 TSGA13Q96PP4 275 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 AGAP2Q99490 1192 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 ZNF395Q9H8N7 513 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 DNAJB4Q9UDY4 337 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 MRPL42Q9Y6G3 142 aaKnown RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 TMEM189-UBE2V1I3L0A0 370 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 TADA2AO75478 443 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 KITP10721 976 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 HOXC13P31276 330 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 TUBP50607 506 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 NFE2Q16621 373 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 DDR2Q16832 855 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 PPM1JQ5JR12 505 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 MANEALQ5VSG8 457 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 KCNMB4Q86W47 210 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 SLAIN1Q8ND83 568 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 UTP4Q969X6 686 aaKnown RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 SLC7A6OSQ96CW6 309 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 C20orf96Q9NUD7 363 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 KCNK4Q9NYG8 393 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 MARCOQ9UEW3 520 aaPredicted RBP20.62■□□□□ 0.89
VSX1-202ENST00000376709 EMCNQ9ULC0 261 aa20.62■□□□□ 0.89
VSX1-202ENST00000376709 ARVCFO00192 962 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms