RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CDT1Q9H211 546 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.84■□□□□ 0.29
TRIM39-201ENST00000376656 INO80B-WBP1J3KQ70 363 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 VAPBO95292 243 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 POLBP06746 335 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 NDST2P52849 883 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM62Q0P6H9 643 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 PYROXD2Q8N2H3 581 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 CPSF7Q8N684 471 aaKnown RBP16.84■□□□□ 0.29
TRIM39-201ENST00000376656 ISL2Q96A47 359 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 NMRAL1Q9HBL8 299 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 ARHGEF38Q9NXL2 777 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 FAF1Q9UNN5 650 aaPredicted RBP16.84■□□□□ 0.29
TRIM39-201ENST00000376656 AP4E1Q9UPM8 1137 aa16.84■□□□□ 0.29
TRIM39-201ENST00000376656 GABBR2O75899 941 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 PIGNO95427 931 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 H6PDO95479 791 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 RPL14P50914 215 aaKnown RBP16.83■□□□□ 0.29
TRIM39-201ENST00000376656 PGGT1BP53609 377 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 LIMK2P53671 638 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 TXNL4AP83876 142 aaKnown RBP16.83■□□□□ 0.29
TRIM39-201ENST00000376656 SLC6A3Q01959 620 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 PLOD1Q02809 727 aaPredicted RBP16.83■□□□□ 0.29
TRIM39-201ENST00000376656 CLEC14AQ86T13 490 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 TMEM165Q9HC07 324 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 FAM49BQ9NUQ9 324 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 GGA3Q9NZ52 723 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 SEPT10Q9P0V9 454 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 ZDHHC2Q9UIJ5 367 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 RAP2CQ9Y3L5 183 aa16.83■□□□□ 0.29
TRIM39-201ENST00000376656 RNF103O00237 685 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 ZFXP17010 805 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 GOT1P17174 413 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 UBA1P22314 1058 aaKnown RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 ARL13AQ5H913 290 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 IER5Q5VY09 327 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 MYO1HQ8N1T3 1032 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 LRTOMTQ8WZ04 291 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF597Q96LX8 424 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 EFCAB1Q9HAE3 211 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 OXSMQ9NWU1 459 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 CNOT11Q9UKZ1 510 aaKnown RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 BARX2Q9UMQ3 279 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 PAPSS1O43252 624 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 C2P06681 752 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 SETSIPP0DME0 302 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 SPRP35270 261 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 CDH15P55291 814 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 IKBKEQ14164 716 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 CARM1Q86X55 608 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 BBS5Q8N3I7 341 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 CCDC185Q8N715 623 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF669Q96BR6 464 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-201ENST00000376656 HPDLQ96IR7 371 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 WRNIP1Q96S55 665 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 PCDHAC1Q9H158 963 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
TRIM39-201ENST00000376656 PSME4Q14997 1843 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 H3BNH8 94 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 TK2O00142 265 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 PLOD2O00469 737 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 TFEBP19484 476 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 GRIA4P48058 902 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 ENTPD1P49961 510 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 STXBP2Q15833 593 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 PPP1R26Q5T8A7 1209 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 SETD3Q86TU7 594 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 TTC30AQ86WT1 665 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 CLEC4CQ8WTT0 213 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 SREK1Q8WXA9 508 aaKnown RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 PPP1R14BQ96C90 147 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 SLC29A1Q99808 456 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 TMEM79Q9BSE2 394 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 PDZD7Q9H5P4 517 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 ZBTB26Q9HCK0 441 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 ADA2Q9NZK5 511 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 BLOC1S6Q9UL45 172 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 TCAF2A6NFQ2 919 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 WNT10BO00744 389 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 RPL10P27635 214 aaKnown RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 GFM2Q969S9 779 aaKnown RBP16.82■□□□□ 0.28
TRIM39-201ENST00000376656 P2RY11Q96G91 374 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 NAT9Q9BTE0 207 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 OLAHQ9NV23 265 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 RRN3Q9NYV6 651 aa16.82■□□□□ 0.28
TRIM39-201ENST00000376656 ZNF487B1APH4 448 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 ACKR2O00590 384 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MFSD11O43934 449 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 USP12O75317 370 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 FARP2O94887 1054 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 IL18RAPO95256 599 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 NSUN2Q08J23 767 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 SFSWAPQ12872 951 aaKnown RBP16.81■□□□□ 0.28
TRIM39-201ENST00000376656 PTK2BQ14289 1009 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 SPANXN3Q5MJ09 141 aa16.81■□□□□ 0.28
TRIM39-201ENST00000376656 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms