RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ORAI3Q9BRQ5 295 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 C2orf49Q9BVC5 232 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-204ENST00000376643 COX16Q9P0S2 106 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 SERGEFQ9UGK8 458 aa15.18■□□□□ 0.02
HDAC6-204ENST00000376643 M0QYT0 321 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 LATO43561 262 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 RNGTTO60942 597 aaKnown RBP15.17■□□□□ 0.02
HDAC6-204ENST00000376643 SLC9A1P19634 815 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 PON1P27169 355 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 CLCN6P51797 869 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 NME3Q13232 169 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 SMAD1Q15797 465 aaKnown RBP15.17■□□□□ 0.02
HDAC6-204ENST00000376643 SETMARQ53H47 684 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-204ENST00000376643 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 CXorf57Q6NSI4 855 aaKnown RBP15.17■□□□□ 0.02
HDAC6-204ENST00000376643 OLFML1Q6UWY5 402 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 FAM183BPQ6ZVS7 135 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 TRIM69Q86WT6 500 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 AADATQ8N5Z0 425 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
HDAC6-204ENST00000376643 MFSD2AQ8NA29 543 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 FAM131CQ96AQ9 280 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 MUC3BQ9H195 1237 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 WDCPQ9H6R7 721 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 PREBQ9HCU5 417 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 TOR4AQ9NXH8 423 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 DNAJC12Q9UKB3 198 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 VANGL2Q9ULK5 521 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 BTBD3Q9Y2F9 522 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 NUMA1Q14980 2115 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 CFAP47Q6ZTR5 3102 aa15.17■□□□□ 0.02
HDAC6-204ENST00000376643 GOLGA8CPA6NN73 597 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 TLR4O00206 839 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 MCF2LO15068 1137 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 GADD45BO75293 160 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 LDOC1O95751 146 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 RECQLP46063 649 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 STK19P49842 368 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 ILKQ13418 452 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 STAT4Q14765 748 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 C5orf22Q49AR2 442 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 C6orf118Q5T5N4 469 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 NEK5Q6P3R8 708 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 SETD3Q86TU7 594 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 PASD1Q8IV76 773 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 FRS2Q8WU20 508 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 PGAP3Q96FM1 320 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 FEM1AQ9BSK4 669 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC6-204ENST00000376643 HS3ST2Q9Y278 367 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 TBC1D30Q9Y2I9 924 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 SLCO1B1Q9Y6L6 691 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 CABIN1Q9Y6J0 2220 aa15.16■□□□□ 0.02
HDAC6-204ENST00000376643 ZFHX4Q86UP3 3567 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 A0A1W2PR77 199 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 PRAMEF26H0Y7S4 382 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 ENC1O14682 589 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 LSM8O95777 96 aaKnown RBP15.15■□□□□ 0.02
HDAC6-204ENST00000376643 PRNPP04156 253 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 CAPNS1P04632 268 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 RHOCP08134 193 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 RXRGP48443 463 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 NXPH1P58417 271 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 TAF5Q15542 800 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 DLG2Q15700 870 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 CT47A1Q5JQC4 288 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-204ENST00000376643 GJB7Q6PEY0 223 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 LAYNQ6UX15 382 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 CIR1Q86X95 450 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-204ENST00000376643 WDTC1Q8N5D0 677 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 SH2D3CQ8N5H7 860 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 DCAF4L2Q8NA75 395 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 FAM174AQ8TBP5 190 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 PPP1R16AQ96I34 528 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 CNDP2Q96KP4 475 aaKnown RBP15.15■□□□□ 0.02
HDAC6-204ENST00000376643 NDST4Q9H3R1 872 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 SCUBE2Q9NQ36 999 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 ARHGEF38Q9NXL2 777 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 PPM1HQ9ULR3 514 aa15.15■□□□□ 0.02
HDAC6-204ENST00000376643 PKD1L2Q7Z442 2459 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 KCNK3O14649 394 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 PAGE1O75459 146 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 RFPL3O75679 317 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 GRAP2O75791 330 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 ERBB2P04626 1255 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 TPM2P07951 284 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 ERCC5P28715 1186 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-204ENST00000376643 EPHA8P29322 1005 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-204ENST00000376643 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-204ENST00000376643 DRD3P35462 400 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 CXCR3P49682 368 aa15.14■□□□□ 0.01
HDAC6-204ENST00000376643 PITX1P78337 314 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-204ENST00000376643 IL9RQ01113 521 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms