RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TOR4AQ9NXH8 423 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 MCIDASD6RGH6 385 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CYP1A1P04798 512 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 OR56A5P0C7T3 313 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 HOXB8P17481 243 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 HUNKP57058 714 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CCZ1BP86790 482 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CCZ1P86791 482 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 MGAT5Q09328 741 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 IL18Q14116 193 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 TNFAIP8L1Q8WVP5 186 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 VPS28Q9UK41 221 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CLEC4AQ9UMR7 237 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CD151P48509 253 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 PSME3P61289 254 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 PRKCEQ02156 737 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 KCNK4Q9NYG8 393 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 C2CD2Q9Y426 696 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ZNF7P17097 686 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 KCNJ1P48048 391 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ARL10Q8N8L6 244 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 BORCS5Q969J3 196 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 SUCOQ9UBS9 1254 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 RGSL1A5PLK6 1076 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 TSPAN4O14817 238 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 KCNA6P17658 529 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CACNB3P54284 484 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 DMGDHQ9UI17 866 aaKnown RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ASXL2Q76L83 1435 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 OR7A10O76100 309 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 HLA-DRAP01903 254 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 SERPINF2P08697 491 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 S100A3P33764 101 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 UGT2B15P54855 530 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 RFX4Q33E94 735 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-205ENST00000376636 CD302Q8IX05 232 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 ZFP28Q8NHY6 868 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
VPS13A-205ENST00000376636 OPLAHO14841 1288 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 GYPCP04921 128 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MSR1P21757 451 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 GP5P40197 560 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CDH17Q12864 832 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 ACAP1Q15027 740 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 SHC4Q6S5L8 630 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CCDC54Q8NEL0 328 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 C17orf50Q8WW18 174 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 DCLK3Q9C098 648 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 ARMCX1Q9P291 453 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 AK5Q9Y6K8 562 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PLIN3O60664 434 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 LARGE1O95461 756 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PRH1P02810 166 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MCL1Q07820 350 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 QRICH1Q2TAL8 776 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 SULT1C3Q6IMI6 304 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 TRMT11Q7Z4G4 463 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 FGFR3P22607 806 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 ENPEPQ07075 957 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 HPS1Q92902 700 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 NFKB1P19838 968 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CRATP43155 626 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 OR1G1P47890 313 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MIIPQ5JXC2 388 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 ANKRD26P1Q6NSI1 321 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 BPIFB6Q8NFQ5 453 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MED28Q9H204 178 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 AKAP8O43823 692 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 IFNGP01579 166 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PGAM1P18669 254 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 POLR2LP62875 67 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 C12orf66Q96MD2 445 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 TMEM5Q9Y2B1 443 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 REM1O75628 298 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PCDHGC5Q9Y5F6 944 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 RPL4P36578 427 aaKnown RBP11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PLD1Q13393 1074 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CYP2R1Q6VVX0 501 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
VPS13A-205ENST00000376636 PAGE2Q7Z2X7 111 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms