RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 GRIA1P42261 906 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 SLC1A6P48664 564 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 CXCR3P49682 368 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 NDUFV1P49821 464 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 LIMK2P53671 638 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 TSPY1Q01534 308 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 ASPHQ12797 758 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 CDH17Q12864 832 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
UBR4-203ENST00000375225 DSC3Q14574 896 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 TIGD7Q6NT04 549 aaPredicted RBP12.49□□□□□ -0.41
UBR4-203ENST00000375225 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 LRRC8DQ7L1W4 858 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
UBR4-203ENST00000375225 LRRC49Q8IUZ0 686 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 LMNTD2Q8IXW0 634 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBR4-203ENST00000375225 PPFIBP2Q8ND30 876 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 RDH11Q8TC12 318 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 ARNTL2Q8WYA1 636 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 RBBP8Q99708 897 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 SMOQ99835 787 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 MECRQ9BV79 373 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 C1orf21Q9H246 121 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 WDR6Q9NNW5 1121 aaKnown RBP12.49□□□□□ -0.41
UBR4-203ENST00000375225 RNF19AQ9NV58 838 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 DNAJC28Q9NX36 388 aa12.49□□□□□ -0.41
UBR4-203ENST00000375225 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 YJEFN3A6XGL0 299 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 F8W8V4 182 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 ZNF623O75123 536 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 BEST1O76090 585 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 CYP11A1P05108 521 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TPBGLP0DKB5 382 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 HSPA8P11142 646 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 PGM1P36871 562 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 KPNA2P52292 529 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 MXRA7P84157 204 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 GRIK3Q13003 919 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 PDE1CQ14123 709 aaPredicted RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 TAF11Q15544 211 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TRMT5Q32P41 509 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 FSCBQ5H9T9 825 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 MBLAC2Q68D91 279 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 PDPK2PQ6A1A2 396 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 PM20D1Q6GTS8 502 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TLDC1Q6P9B6 456 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 CCDC117Q8IWD4 279 aaPredicted RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 CCDC33Q8N5R6 958 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 OR52K1Q8NGK4 314 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 NDRG1Q92597 394 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 ZNF333Q96JL9 665 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TSGA13Q96PP4 275 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 GAD1Q99259 594 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 ADAM2Q99965 735 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 FTHL17Q9BXU8 183 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 NMUR2Q9GZQ4 415 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TKTL2Q9H0I9 626 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 GEMIN8Q9NWZ8 242 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 FNIP2Q9P278 1114 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 OR12D3Q9UGF7 316 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 ANGPTL2Q9UKU9 493 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 SOX13Q9UN79 622 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 MFHAS1Q9Y4C4 1052 aa12.48□□□□□ -0.41
UBR4-203ENST00000375225 TDRD15B5MCY1 1934 aaKnown RBP12.48□□□□□ -0.41
UBR4-203ENST00000375225 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 HMX2A2RU54 273 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 MYBPHLA2RUH7 354 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 ARL5CA6NH57 179 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 B2RBV5 119 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 NRP1O14786 923 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
UBR4-203ENST00000375225 NEBLO76041 1014 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 PROCP04070 461 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 ALDOAP04075 364 aaKnown RBP12.47□□□□□ -0.41
UBR4-203ENST00000375225 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
UBR4-203ENST00000375225 RALBP11234 206 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 CPA3P15088 417 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 PAMP19021 973 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 GNAZP19086 355 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 AOC1P19801 751 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 CCNCP24863 283 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 GCKP35557 465 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 CLCNKBP51801 687 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 RAP1GDS1P52306 607 aa12.47□□□□□ -0.41
UBR4-203ENST00000375225 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
UBR4-203ENST00000375225 MPP3Q13368 585 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms