RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ABCG1P45844 678 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 NDST1P52848 882 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 SP3Q02447 781 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 SEMA5AQ13591 1074 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 PLD6Q8N2A8 252 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MRPS26Q9BYN8 205 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 SEPT10Q9P0V9 454 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MFHAS1Q9Y4C4 1052 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 PIK3R1P27986 724 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 HPCAP84074 193 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MYBPC1Q00872 1141 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 CCL14Q16627 93 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MFSD14CQ5VZR4 134 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 BNC2Q6ZN30 1099 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 TRIM50Q86XT4 487 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 TDRD5Q8NAT2 981 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ABTB1Q969K4 478 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ZFRQ96KR1 1074 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 SNX15Q9NRS6 342 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 DNAAF2Q9NVR5 837 aaKnown RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 RAB26Q9ULW5 256 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 MGAMO43451 1857 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 AMHP03971 560 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 THRAP10827 490 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 TCN1P20061 433 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 GARSP41250 739 aaKnown RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 ADGRE1Q14246 886 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 DGKDQ16760 1214 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 GOLGA7BQ2TAP0 167 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 IER5Q5VY09 327 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 STEAP4Q687X5 459 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 JADE1Q6IE81 842 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 NAPRTQ6XQN6 538 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 DSELQ8IZU8 1212 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 KYQ8NBH2 561 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 COLGALT1Q8NBJ5 622 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 LGMNQ99538 433 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 B3GNT5Q9BYG0 378 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 SYBUQ9NX95 663 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 FAM58BPP0C7Q3 252 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PRDX6P30041 224 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 COG7P83436 770 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 CYTH1Q15438 398 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 GJC2Q5T442 439 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 C16orf89Q6UX73 402 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 DCLK2Q8N568 766 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 HPDLQ96IR7 371 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 TBCBQ99426 244 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 CDT1Q9H211 546 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 RNF186Q9NXI6 227 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 DMTF1Q9Y222 760 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 RPS6KL1Q9Y6S9 549 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 ARHGAP10A1A4S6 786 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 GNRH1P01148 92 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 P4HA1P13674 534 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PGAM1P18669 254 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 EPHA3P29320 983 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 GP5P40197 560 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 TMED1Q13445 227 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 INSCQ1MX18 579 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 NXNQ6DKJ4 435 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 KLC3Q6P597 504 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 RCN3Q96D15 328 aa11.32□□□□□ -0.6
CCDC40-203ENST00000374877 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PRPF19Q9UMS4 504 aaKnown RBP11.32□□□□□ -0.6
CCDC40-203ENST00000374877 PCSK6P29122 969 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 MXD4Q14582 209 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-203ENST00000374877 PDK1Q15118 436 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 DLG2Q15700 870 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 AMIGO2Q86SJ2 522 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 AHI1Q8N157 1196 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 TRAPPC12Q8WVT3 735 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 PPP1R16BQ96T49 567 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 PKP2Q99959 881 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 CAB39LQ9H9S4 337 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 SAGE1Q9NXZ1 904 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 MDM4O15151 490 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 CHRNGP07510 517 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 AKR1A1P14550 325 aa11.31□□□□□ -0.6
CCDC40-203ENST00000374877 MPSTP25325 297 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms