RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SLC23A1Q9UHI7 598 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 KCNE5Q9UJ90 142 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 ODF2LQ9ULJ1 636 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 NENFQ9UMX5 172 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 NOX1Q9Y5S8 564 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 COMMD10Q9Y6G5 202 aa5.13□□□□□ -1.59
USP48-202ENST00000374730 ZNFX1Q9P2E3 1918 aaKnown RBP5.13□□□□□ -1.59
USP48-202ENST00000374730 SIP14410 1827 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 PCSK5Q92824 1860 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 CLRN2A0PK11 232 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 RSPH10B2B2RC85 870 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 H3BQF6 201 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 CES2O00748 559 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 WDR46O15213 610 aaKnown RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 TGFB1I1O43294 461 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 SRGAP2O75044 1071 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 AKAP3O75969 853 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 GCNT3O95395 438 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ICAM1P05362 532 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 RSPH10BP0C881 870 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 UCHL3P15374 230 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 FERP16591 822 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 FGFR4P22455 802 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 PON1P27169 355 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 PSMC2P35998 433 aaKnown RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 CYP4A11Q02928 519 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 KLHL30Q0D2K2 578 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 MPP3Q13368 585 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 MTM1Q13496 603 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ALCAMQ13740 583 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 RAPGEF1Q13905 1077 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 PPP2R5AQ15172 486 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 NAB2Q15742 525 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 EXOC3L4Q17RC7 722 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 GLE1Q53GS7 698 aaKnown RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 KLHDC7AQ5VTJ3 777 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ZNF529Q6P280 563 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 CCDC174Q6PII3 467 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 GBP6Q6ZN66 633 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 SPICE1Q8N0Z3 855 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 SPATA4Q8NEY3 305 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 OR2I1PQ8NGU4 316 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 CYP2W1Q8TAV3 490 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 AENQ8WTP8 325 aaKnown RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 STON2Q8WXE9 905 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 TBC1D5Q92609 795 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 LPAR1Q92633 364 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 SLC35C1Q96A29 364 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 CAPZA3Q96KX2 299 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 FIZ1Q96SL8 496 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 MXRA8Q9BRK3 442 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 STRA6Q9BX79 667 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 TLR10Q9BXR5 811 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 FAM126AQ9BYI3 521 aaPredicted RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 ALOXE3Q9BYJ1 711 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 UNC45AQ9H3U1 944 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ZHX3Q9H4I2 956 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 PARVGQ9HBI0 331 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 SIX2Q9NPC8 291 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 DMAC2Q9NW81 257 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 MAP3K20Q9NYL2 800 aaKnown RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 RGL1Q9NZL6 768 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.12□□□□□ -1.59
USP48-202ENST00000374730 INTUQ9ULD6 942 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 ACTL7AQ9Y615 435 aa5.12□□□□□ -1.59
USP48-202ENST00000374730 WDR90Q96KV7 1748 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 LCTP09848 1927 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 POLR2AP24928 1970 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 MYH9P35579 1960 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 A0A087X0T9 212 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 SHTN1A0MZ66 631 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FLOT1O75955 427 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 LYPLA2O95372 231 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 ESRRBO95718 433 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 AMY1AP04745 511 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FAM228BP0C875 321 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 ITGAMP11215 1152 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 KCNA3P22001 575 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FDXRP22570 491 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 KLRC1P26715 233 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 PAFAH1B1P43034 410 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 CASP4P49662 377 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 SNRPFP62306 86 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 CXADRP78310 365 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 MCL1Q07820 350 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 C2orf54Q08AI8 447 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FOXI1Q12951 378 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 MAPK7Q13164 816 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 CTTNQ14247 550 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 TNIP1Q15025 636 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 EZH2Q15910 746 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 CFAP221Q4G0U5 840 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 TAF3Q5VWG9 929 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 NFRKBQ6P4R8 1299 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 EMBQ6PCB8 327 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 CCNI2Q6ZMN8 369 aaPredicted RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 ZNF720Q7Z2F6 126 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms