RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ZNF280DQ6N043 979 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 KYAT3Q6YP21 454 aaKnown RBP17.42■□□□□ 0.38
RXRB-201ENST00000374680 TMPRSS6Q8IU80 811 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 ULK2Q8IYT8 1036 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PYDC1Q8WXC3 89 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 MYLPFQ96A32 169 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 OMDQ99983 421 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 TUBB6Q9BUF5 446 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 CCDC106Q9BWC9 280 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 NDFIP2Q9NV92 336 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 FBXW11Q9UKB1 542 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
RXRB-201ENST00000374680 TK2O00142 265 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 NEBLO76041 1014 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 C2P06681 752 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PCSK7Q16549 785 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 TAC4Q86UU9 113 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 MARK4Q96L34 752 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PANX3Q96QZ0 392 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 FTHL17Q9BXU8 183 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 LRRC40Q9H9A6 602 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 STOML1Q9UBI4 398 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 DCDC2Q9UHG0 476 aa17.42■□□□□ 0.38
RXRB-201ENST00000374680 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 ITGB1P05556 798 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 GSTA2P09210 222 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 IDH3AP50213 366 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 TUBP50607 506 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 TCHHL1Q5QJ38 904 aaPredicted RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 STEAP4Q687X5 459 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 ANO7Q6IWH7 933 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 KCNMB4Q86W47 210 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 RNF135Q8IUD6 432 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 DENND6AQ8IWF6 608 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 C2orf69Q8N8R5 385 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 NT5C3BQ969T7 300 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SORT1Q99523 831 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 DDX50Q9BQ39 737 aaKnown RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 MPP6Q9NZW5 540 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 PLXNB2O15031 1838 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 M0QZ92 97 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SIN3BO75182 1162 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 AXLP30530 894 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 PAFAH1B3Q15102 231 aaKnown RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 SCN4BQ8IWT1 228 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.38
RXRB-201ENST00000374680 MAPK15Q8TD08 544 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 TASP1Q9H6P5 420 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SERPINE1P05121 402 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 MLNP12872 115 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 CD52P31358 61 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 RPL34P49207 117 aaKnown RBP17.41■□□□□ 0.38
RXRB-201ENST00000374680 CPT1AP50416 773 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 HUNKP57058 714 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 ITGA7Q13683 1181 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 GRM3Q14832 879 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 ISLR2Q6UXK2 745 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 LRRC74BQ6ZQY2 392 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.41■□□□□ 0.38
RXRB-201ENST00000374680 CNTD1Q8N815 330 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 GPR152Q8TDT2 470 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 SLC2A13Q96QE2 648 aa17.41■□□□□ 0.38
RXRB-201ENST00000374680 PDE4DIPQ5VU43 2346 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 ZCWPW2A0A1B0GU75 182 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 GABRDO14764 452 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 BIRC5O15392 142 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 CIB2O75838 187 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 AP2A1O95782 977 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 SPRP35270 261 aaPredicted RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 SERPINB5P36952 375 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 CHRNA4P43681 627 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 MPP3Q13368 585 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 SEPT6Q14141 434 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 ARL13BQ3SXY8 428 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 SLC9B1Q4ZJI4 515 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 GDF6Q6KF10 455 aaPredicted RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 AGMOQ6ZNB7 445 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 ZNF354CQ86Y25 554 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 ENDOVQ8N8Q3 282 aaKnown RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 YIPF3Q9GZM5 350 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 LRRC42Q9Y546 428 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 VAPBO95292 243 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 SERPINA6P08185 405 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 GARSP41250 739 aaKnown RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 ABCE1P61221 599 aaKnown RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 SLC34A1Q06495 639 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 CUL3Q13618 768 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 USP10Q14694 798 aaKnown RBP17.4■□□□□ 0.38
RXRB-201ENST00000374680 TSNAXIP1Q2TAA8 658 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 NXNQ6DKJ4 435 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 TIFABQ6ZNK6 161 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 KBTBD2Q8IY47 623 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 COG4Q9H9E3 785 aa17.4■□□□□ 0.38
RXRB-201ENST00000374680 SLC2A6Q9UGQ3 507 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms