RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
CXCL12-203ENST00000374429 POLBP06746 335 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PTPRRQ15256 657 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 C14orf80Q86SX3 495 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SPATS2Q86XZ4 545 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 C10orf107Q8IVU9 208 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 EFHBQ8N7U6 833 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ZNF670Q9BS34 389 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ACTR5Q9H9F9 607 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 RLFQ13129 1914 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NEMP2A6NFY4 417 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 HSPA4LO95757 839 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 FYNP06241 537 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 GABRB2P47870 512 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PDK4Q16654 411 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ANO4Q32M45 955 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 MORN1Q5T089 497 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 WLSQ5T9L3 541 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SLC44A1Q8WWI5 657 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SMARCD1Q96GM5 515 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 TSNARE1Q96NA8 513 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 FCRL3Q96P31 734 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NUDCD1Q96RS6 583 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NFKBIZQ9BYH8 718 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SENP6Q9GZR1 1112 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SLC38A7Q9NVC3 462 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 TLK1Q9UKI8 766 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 MTO1Q9Y2Z2 717 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 UBA6A0AVT1 1052 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NCF1BA6NI72 391 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NCF1CA8MVU1 366 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 BHMG1C9JSJ3 638 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 C9JVG2 144 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 CAPN15O75808 1086 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PDE5AO76074 875 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NCF1P14598 390 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ARSAP15289 507 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PAPOLAP51003 745 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 MPP1Q00013 466 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SLC12A1Q13621 1099 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 C17orf99Q6UX52 265 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 ARHGAP22Q7Z5H3 698 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PLD6Q8N2A8 252 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 DCBLD1Q8N8Z6 715 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 FBXO27Q8NI29 283 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 C20orf27Q9GZN8 174 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 BATF3Q9NR55 127 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PAPOLBQ9NRJ5 636 aaKnown RBP11.04□□□□□ -0.64
CXCL12-203ENST00000374429 TMEM216Q9P0N5 145 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 SLC24A2Q9UI40 661 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 NUMBLQ9Y6R0 609 aa11.04□□□□□ -0.64
CXCL12-203ENST00000374429 CNTN5O94779 1100 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 SERPINB5P36952 375 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 USP46P62068 366 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 THOC5Q13769 683 aaKnown RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 LPIN1Q14693 890 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 SIGLEC10Q96LC7 697 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 HSFY1Q96LI6 401 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 PPP1R10Q96QC0 940 aaKnown RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 WDR55Q9H6Y2 383 aaPredicted RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 GMIPQ9P107 970 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 TK2O00142 265 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 LHX1P48742 406 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 DPYSL2Q16555 572 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 ESRP1Q6NXG1 681 aaKnown RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 PDZD4Q76G19 769 aaPredicted RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 SLC41A1Q8IVJ1 513 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 BANPQ8N9N5 519 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 FBXO32Q969P5 355 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 TBC1D10AQ9BXI6 508 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 RXFP1Q9HBX9 757 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 DMAP1Q9NPF5 467 aaPredicted RBP11.03□□□□□ -0.64
CXCL12-203ENST00000374429 GKN1Q9NS71 199 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
CXCL12-203ENST00000374429 ATP6AP2A0A1C7CYW4 349 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 J3KR12 359 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 FCHO1O14526 889 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 ATP6AP2O75787 350 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 FSBPO95073 299 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 ZWINTO95229 277 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 HDCP19113 662 aa11.02□□□□□ -0.64
CXCL12-203ENST00000374429 PTPN3P26045 913 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms