RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ADGRF1Q5T601 910 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 IGDCC3Q8IVU1 814 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 KRT222Q8N1A0 295 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 ELMOD1Q8N336 334 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 ATPAF2Q8N5M1 289 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 MCUQ8NE86 351 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 EXOC4Q96A65 974 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 SERPINB12Q96P63 405 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 IL12RB2Q99665 862 aa16.07■□□□□ 0.16
NIPAL3-204ENST00000374399 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 RASA4BC9J798 803 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 MATN3O15232 486 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 RASA4O43374 803 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 CACNG3O60359 315 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 LPXNO60711 386 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 ACSL3O95573 720 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 JCHAINP01591 159 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 FDFT1P37268 417 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 PDIA2Q13087 525 aaKnown RBP16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 TTMPQ5BVD1 217 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 PID1Q7Z2X4 250 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 FAM217AQ8IXS0 508 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 KLHDC8BQ8IXV7 354 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 UHMK1Q8TAS1 419 aaKnown RBP16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 MAML1Q92585 1016 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 ACBD3Q9H3P7 528 aa16.06■□□□□ 0.16
NIPAL3-204ENST00000374399 J3KR12 359 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 MTSS1O43312 755 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ZNF189O75820 626 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 STK10O94804 968 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 RHOP08100 348 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 PTPN2P17706 415 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 OAS2P29728 719 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ACVRL1P37023 503 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 MAPKAPK2P49137 400 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ARL4CP56559 192 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 NTHL1P78549 312 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 KCNC3Q14003 757 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 PRSS36Q5K4E3 855 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ZNF697Q5TEC3 545 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 DENND2CQ68D51 928 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 CENPUQ71F23 418 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ZBED8Q8IZ13 594 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 PDCD7Q8N8D1 485 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 AGAP3Q96P47 875 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 VAT1Q99536 393 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 MLPHQ9BV36 600 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 GBA3Q9H227 469 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 KLHL8Q9P2G9 620 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 EIF3HO15372 352 aaKnown RBP eCLIP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 PAPLNO95428 1278 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 LATS1O95835 1130 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 HNRNPA1P09651 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 CCNB1P14635 433 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 GPX6P59796 221 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 CEP85LQ5SZL2 805 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 KCTD11Q693B1 232 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 LRRC49Q8IUZ0 686 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 VN1R2Q8NFZ6 395 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 USP33Q8TEY7 942 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 FATE1Q969F0 183 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 SMG9Q9H0W8 520 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 PLAC1Q9HBJ0 212 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 TRHDEQ9UKU6 1024 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 TEX264Q9Y6I9 313 aa16.05■□□□□ 0.16
NIPAL3-204ENST00000374399 C2orf16Q68DN1 1984 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 TRAV19A0A0A6YYK7 116 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 A0A0D9SEW6 157 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 TSPAN3O60637 253 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 CKMP06732 381 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 PFKLP17858 780 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 NFKB1P19838 968 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 OR1E1P30953 314 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 CDH4P55283 916 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 OLIG2Q13516 323 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 SERINC3Q13530 473 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 TEAD2Q15562 447 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 HTR3DQ70Z44 454 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 ANKMY2Q8IV38 441 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 FERMT1Q9BQL6 677 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 PRKD2Q9BZL6 878 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 RETREG1Q9H6L5 497 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 ZDHHC7Q9NXF8 308 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 CCL26Q9Y258 94 aa16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.04■□□□□ 0.16
NIPAL3-204ENST00000374399 RAMP2O60895 175 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 HLA-DQB2P05538 268 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 POU2F2P09086 479 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms