RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PGBD3Q8N328 593 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 HMGB4Q8WW32 186 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 HSPH1Q92598 858 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 RPL10LQ96L21 214 aaKnown RBP16.39■□□□□ 0.21
HDHD3-202ENST00000374180 MRGPRX3Q96LB0 322 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
HDHD3-202ENST00000374180 SPON2Q9BUD6 331 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 C2orf49Q9BVC5 232 aaPredicted RBP16.39■□□□□ 0.21
HDHD3-202ENST00000374180 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 BCCIPQ9P287 314 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDHD3-202ENST00000374180 SUN2Q9UH99 717 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 R4GN57 208 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 MYO15AQ9UKN7 3530 aa16.39■□□□□ 0.21
HDHD3-202ENST00000374180 DOCK4Q8N1I0 1966 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 FGF10O15520 208 aaPredicted RBP16.38■□□□□ 0.21
HDHD3-202ENST00000374180 MAN1A1P33908 653 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
HDHD3-202ENST00000374180 NHLH1Q02575 133 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 SLC25A11Q02978 314 aaKnown RBP16.38■□□□□ 0.21
HDHD3-202ENST00000374180 TXNRD3NBQ6F5E7 133 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 RASSF3Q86WH2 238 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 ZNF366Q8N895 744 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 RTL3Q8N8U3 475 aaKnown RBP16.38■□□□□ 0.21
HDHD3-202ENST00000374180 KDM1BQ8NB78 822 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 MDGA1Q8NFP4 955 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 OR7D4Q8NG98 312 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 TEKT4Q8WW24 435 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDHD3-202ENST00000374180 DONSONQ9NYP3 566 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 SLCO3A1Q9UIG8 710 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 SLC25A13Q9UJS0 675 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
HDHD3-202ENST00000374180 RAMP2O60895 175 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 GOT1P17174 413 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 ETFBP38117 255 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 STK19P49842 368 aaPredicted RBP16.37■□□□□ 0.21
HDHD3-202ENST00000374180 POLD3Q15054 466 aaPredicted RBP16.37■□□□□ 0.21
HDHD3-202ENST00000374180 DPYSL2Q16555 572 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 IL31Q6EBC2 164 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 CPNE8Q86YQ8 564 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 DCAF4L2Q8NA75 395 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 MYO19Q96H55 970 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 PSMB7Q99436 277 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 MAGEH1Q9H213 219 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 CD248Q9HCU0 757 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 ATP13A1Q9HD20 1204 aa16.37■□□□□ 0.21
HDHD3-202ENST00000374180 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
HDHD3-202ENST00000374180 A0A0A6YYK5 440 aaPredicted RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 WASH4PA8MWX3 477 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 TTC34A8MYJ7 566 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 H3BRJ5 948 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 CBX4O00257 560 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 SNAP91O60641 907 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 KRT7P08729 469 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 GABRG2P18507 467 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 CNR2P34972 360 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 GJC1P36383 396 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 ARL4AP40617 200 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 HCAR3P49019 387 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 MRE11P49959 708 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 CAMK2GQ13555 558 aaPredicted RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 HNRNPA1L2Q32P51 320 aaKnown RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 ACRBPQ8NEB7 543 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 ARHGEF2Q92974 986 aaKnown RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 TPSD1Q9BZJ3 242 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 VPS51Q9UID3 782 aa16.36■□□□□ 0.21
HDHD3-202ENST00000374180 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
HDHD3-202ENST00000374180 RCCD1A6NED2 376 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 LILRB5O75023 590 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 ERCC2P18074 760 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 ACVRL1P37023 503 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 NBL1P41271 181 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 SLC1A1P43005 524 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-202ENST00000374180 CDH6P55285 790 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 TAS2R40P59535 323 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 KRT81Q14533 505 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 USP39Q53GS9 565 aaKnown RBP16.35■□□□□ 0.21
HDHD3-202ENST00000374180 POLNQ7Z5Q5 900 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 KIAA1328Q86T90 577 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 KCTD6Q8NC69 237 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 MRGPRX1Q96LB2 322 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
HDHD3-202ENST00000374180 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 PRSS16Q9NQE7 514 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 HPCAL4Q9UM19 191 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
HDHD3-202ENST00000374180 HRO43593 1189 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 NDUFV2P19404 249 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 GLDCP23378 1020 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 VAV2P52735 878 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 YBEYP58557 167 aaPredicted RBP16.35■□□□□ 0.21
HDHD3-202ENST00000374180 SLC20A2Q08357 652 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 ZFYVE27Q5T4F4 411 aa16.35■□□□□ 0.21
HDHD3-202ENST00000374180 RETSATQ6NUM9 610 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms