RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 DCDC2Q9UHG0 476 aa24.33■■□□□ 1.49
CDK9-201ENST00000373264 ARHGAP42A6NI28 874 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 MT-CYBP00156 380 aaPredicted RBP24.33■■□□□ 1.48
CDK9-201ENST00000373264 ABL2P42684 1182 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 CCNG1P51959 295 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 CD300LGQ6UXG3 332 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 CCNJLQ8IV13 435 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 TMEM86AQ8N2M4 240 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 DQX1Q8TE96 717 aaKnown RBP24.33■■□□□ 1.48
CDK9-201ENST00000373264 CPNE1Q99829 537 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 IARS2Q9NSE4 1012 aaKnown RBP24.33■■□□□ 1.48
CDK9-201ENST00000373264 NDFIP2Q9NV92 336 aa24.33■■□□□ 1.48
CDK9-201ENST00000373264 DFFAO00273 331 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 RGS2P41220 211 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 TRIM32Q13049 653 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 USP4Q13107 963 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 PEX6Q13608 980 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 THOC5Q13769 683 aaKnown RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 C17orf99Q6UX52 265 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 RAB3IL1Q8TBN0 382 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 HDAC11Q96DB2 347 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 NAT9Q9BTE0 207 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 TUBB6Q9BUF5 446 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 C20orf96Q9NUD7 363 aaPredicted RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 CPSF2Q9P2I0 782 aaKnown RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 SFMBT1Q9UHJ3 866 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 TNPO2O14787 897 aaKnown RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 CD1EP15812 388 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 ZNF157P51786 506 aaPredicted RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 ITGA7Q13683 1181 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 ARL13BQ3SXY8 428 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 FAM91A1Q658Y4 838 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 KDELC2Q7Z4H8 507 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 PGAP3Q96FM1 320 aaPredicted RBP24.32■■□□□ 1.48
CDK9-201ENST00000373264 WASF2Q9Y6W5 498 aa24.32■■□□□ 1.48
CDK9-201ENST00000373264 UPP2O95045 317 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 CCR10P46092 362 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 DPF3Q92784 378 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 APBA2Q99767 749 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 THTPAQ9BU02 230 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 ARHGAP39Q9C0H5 1083 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 PLA2G4CQ9UP65 541 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 NEU3Q9UQ49 428 aa24.31■■□□□ 1.48
CDK9-201ENST00000373264 TBX10O75333 385 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 SERPINE1P05121 402 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 OR4Q2P0C623 313 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 RALBP11234 206 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 LIMK2P53671 638 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 GRTP1Q5TC63 336 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 PDZD4Q76G19 769 aaPredicted RBP24.3■■□□□ 1.48
CDK9-201ENST00000373264 KCNMB4Q86W47 210 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 SLC25A41Q8N5S1 370 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 EPAS1Q99814 870 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 DCLRE1BQ9H816 532 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 CSNK1G1Q9HCP0 422 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 MAN1C1Q9NR34 630 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 TAGLN3Q9UI15 199 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 PADI3Q9ULW8 664 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 PTCH2Q9Y6C5 1203 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 A0A096LPK6 155 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.3■■□□□ 1.48
CDK9-201ENST00000373264 SERPINA6P08185 405 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 AKR1A1P14550 325 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 THPOP40225 353 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 RABGAP1LQ5R372 815 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 NAF1Q96HR8 494 aaKnown RBP24.3■■□□□ 1.48
CDK9-201ENST00000373264 TEKT5Q96M29 485 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 UNKQ9C0B0 810 aaKnown RBP24.3■■□□□ 1.48
CDK9-201ENST00000373264 PRDM16Q9HAZ2 1276 aa24.3■■□□□ 1.48
CDK9-201ENST00000373264 USP1O94782 785 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 SORBS2O94875 1100 aaKnown RBP24.29■■□□□ 1.48
CDK9-201ENST00000373264 IGHA2P01877 340 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 CPA3P15088 417 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 HCAR3P49019 387 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 IDH3AP50213 366 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 ZNF195O14628 629 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 AVPR1AP37288 418 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 SLC25A3Q00325 362 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 STXBP5Q5T5C0 1151 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 PM20D1Q6GTS8 502 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 RASAL3Q86YV0 1011 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 WDR75Q8IWA0 830 aaKnown RBP24.29■■□□□ 1.48
CDK9-201ENST00000373264 Q9Y3F1 56 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 SCN10AQ9Y5Y9 1956 aa24.29■■□□□ 1.48
CDK9-201ENST00000373264 PSMG1O95456 288 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 NUMBP49757 651 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 AIF1P55008 147 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 ZNF781Q8N8C0 355 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 PNPLA1Q8N8W4 532 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 MTG1Q9BT17 334 aaPredicted RBP24.28■■□□□ 1.48
CDK9-201ENST00000373264 ATXN3LQ9H3M9 355 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 SLC39A10Q9ULF5 831 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 G3V2L1 256 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 PHGDHO43175 533 aaKnown RBP24.28■■□□□ 1.48
CDK9-201ENST00000373264 B4GALT3O60512 393 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 C2P06681 752 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 PCSK1P29120 753 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 MAGEA12P43365 314 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 MXRA7P84157 204 aa24.28■■□□□ 1.48
CDK9-201ENST00000373264 GRM3Q14832 879 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms