RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 MEIS3P2A8K0S8 358 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 G3V2L1 256 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 NFKB1P19838 968 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 SERPINB6P35237 376 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 NPY2RP49146 381 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 SMAD1Q15797 465 aaKnown RBP12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 ARL13BQ3SXY8 428 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 C6orf163Q5TEZ5 329 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 IRGCQ6NXR0 463 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 DTX3LQ8TDB6 740 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 KCNK16Q96T55 309 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 AGAP2Q99490 1192 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 THTPAQ9BU02 230 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 KATNAL1Q9BW62 490 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 CSNK1G1Q9HCP0 422 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 SHROOM3Q8TF72 1996 aa12.82□□□□□ -0.36
TSPAN6-201ENST00000373020 MAGEB16A2A368 324 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 MEI4A8MW99 385 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 TMEM114B3SHH9 223 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 TIMM44O43615 452 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CACNG3O60359 315 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CCNT2O60583 730 aaKnown RBP12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 F9P00740 461 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 MYL3P08590 195 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 USP17L7P0C7H9 530 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 NCAM1P13591 858 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 NUMBP49757 651 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 ZNF33AQ06730 810 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 KLC1Q07866 573 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 TMCO4Q5TGY1 634 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 PM20D1Q6GTS8 502 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 C3orf58Q8NDZ4 430 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 MICAL1Q8TDZ2 1067 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 IRGQQ8WZA9 623 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 MFSD3Q96ES6 412 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 TEKT5Q96M29 485 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 EPAS1Q99814 870 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 IL22Q9GZX6 179 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CACNG4Q9UBN1 327 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 NEU3Q9UQ49 428 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 Q9Y3F1 56 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 A0A096LPK6 155 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 ANPEPP15144 967 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 DNAJB2P25686 324 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 PRDX6P30041 224 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 COPAP53621 1224 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 FKBP1BP68106 108 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 MPP3Q13368 585 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CERCAMQ5T4B2 595 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 PDPK2PQ6A1A2 396 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CTU1Q7Z7A3 348 aaKnown RBP12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 KCNMB4Q86W47 210 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 KBTBD2Q8IY47 623 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 SCML4Q8N228 414 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 DNAAF3Q8N9W5 541 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 URGCPQ8TCY9 931 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 SMARCD1Q96GM5 515 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 TSGA13Q96PP4 275 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CDY2AQ9Y6F7 541 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 CDY1Q9Y6F8 540 aa12.81□□□□□ -0.36
TSPAN6-201ENST00000373020 H2AFYO75367 372 aaKnown RBP12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 LRIG2O94898 1065 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 C2P06681 752 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 SKIP12755 728 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 PAX7P23759 505 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 IRF9Q00978 393 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 BEX3Q00994 111 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 ZRSR2Q15696 482 aaKnown RBP12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 TAF2Q6P1X5 1199 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 NAPRTQ6XQN6 538 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 VPS39Q96JC1 886 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 ZNF184Q99676 751 aaPredicted RBP12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 GPR22Q99680 433 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 OXCT2Q9BYC2 517 aaPredicted RBP12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 CDH19Q9H159 772 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 FAM105AQ9NUU6 356 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 PTPRDP23468 1912 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 AP3B1O00203 1094 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 FKBP6O75344 327 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 IGHA2P01877 340 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 LINGO3P0C6S8 592 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 GNAT1P11488 350 aa12.8□□□□□ -0.36
TSPAN6-201ENST00000373020 HADHAP40939 763 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms