RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SOCS2O14508 198 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 AXIN1O15169 862 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PHGDHO43175 533 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 HSPA4LO95757 839 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 F12P00748 615 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 AVPP01185 164 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PDGFRAP16234 1089 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PRKCHP24723 683 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TYK2P29597 1187 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ASPAP45381 313 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CXCR3P49682 368 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 NT5C2P49902 561 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF132P52740 706 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ABCE1P61221 599 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SH3BP2P78314 561 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 GNA12Q03113 381 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 APOFQ13790 326 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TGFBIQ15582 683 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PPP1R3AQ16821 1122 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PLA2G4EQ3MJ16 856 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM259Q4ZIN3 620 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SLC44A4Q53GD3 710 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 DACT2Q5SW24 774 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGEF16Q5VV41 709 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PRAMEF18Q5VWM3 479 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 FAM91A1Q658Y4 838 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 MAP1SQ66K74 1059 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 OR6B2Q6IFH4 312 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 KLC3Q6P597 504 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PACS1Q6VY07 963 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM26Q6ZUK4 368 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF677Q86XU0 584 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ANKRD13AQ8IZ07 590 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 FAM47BQ8NA70 645 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 OR9I1Q8NGQ6 314 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 FNDC8Q8TC99 324 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TRAPPC12Q8WVT3 735 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 VTI1AQ96AJ9 217 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 FCRL3Q96P31 734 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TRPV6Q9H1D0 765 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 C1orf21Q9H246 121 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SPON1Q9HCB6 807 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PTPRHQ9HD43 1115 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TNFRSF12AQ9NP84 129 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SLC38A7Q9NVC3 462 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SYBUQ9NX95 663 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 COPG2Q9UBF2 871 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 GIMAP2Q9UG22 337 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TUBGCP4Q9UGJ1 667 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PSMD13Q9UNM6 376 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TMX2Q9Y320 296 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 DOCK5Q9H7D0 1870 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ATP6AP2A0A1C7CYW4 349 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGEF37A1IGU5 675 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM221A6NGB7 291 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF839A8K0R7 811 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CASQ2O14958 399 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PMM2O15305 246 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 DENRO43583 198 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ATP6AP2O75787 350 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 BBOX1O75936 387 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 KRT38O76015 456 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ATG7O95352 703 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TNFAIP8O95379 198 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CALB1P05937 261 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CPA3P15088 417 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF26P17031 533 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SMPD1P17405 629 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CES1P23141 567 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CHRNA5P30532 468 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 GRIA3P42263 894 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 HSD17B4P51659 736 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 MLLT10P55197 1068 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 BCAR1P56945 870 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TGFB2P61812 414 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 BTG3Q14201 252 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 EMC2Q15006 297 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 STILQ15468 1287 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 CYP2A13Q16696 494 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF699Q32M78 642 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 C6orf183Q5T699 404 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 GPR107Q5VW38 600 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 NANOGP8Q6NSW7 305 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 HMBOX1Q6NT76 420 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 NCCRP1Q6ZVX7 275 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF786Q8N393 782 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM102Q8N9M5 508 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 ZBTB8BQ8NAP8 495 aaPredicted RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 TDRD5Q8NAT2 981 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SMYD1Q8NB12 490 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SNIP1Q8TAD8 396 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 DEPTORQ8TB45 409 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 SLC35B4Q969S0 331 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 C12orf43Q96C57 262 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 FBXL20Q96IG2 436 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PPP1R10Q96QC0 940 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 RANBP9Q96S59 729 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 EBNA1BP2Q99848 306 aaKnown RBP5.53□□□□□ -1.52
ATG4A-204ENST00000372246 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms