RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 HLA-BQ31612 363 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 INAVAQ3KP66 663 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 CCDC183Q5T5S1 534 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 NAA35Q5VZE5 725 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 CPA5Q8WXQ8 436 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 FAM129BQ96TA1 746 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 CDC6Q99741 560 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 ACE2Q9BYF1 805 aaPredicted RBP19.41■□□□□ 0.7
TMEM53-201ENST00000372235 NEUROG2Q9H2A3 272 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 TM9SF3Q9HD45 589 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 TM7SF3Q9NS93 570 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 LIMA1Q9UHB6 759 aaKnown RBP19.41■□□□□ 0.7
TMEM53-201ENST00000372235 TMEM59LQ9UK28 342 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 GON4LQ3T8J9 2241 aa19.41■□□□□ 0.7
TMEM53-201ENST00000372235 CXorf51AA0A1B0GTR3 108 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 TMEM8BA6NDV4 472 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 FAM47DPA6NHR8 397 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 DRGXA6NNA5 263 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 ADCY5O95622 1261 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 CYP1A1P04798 512 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-201ENST00000372235 DESP17661 470 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 MMP8P22894 467 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 PSMD8P48556 350 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 CSNK1EP49674 416 aaKnown RBP19.4■□□□□ 0.7
TMEM53-201ENST00000372235 C21orf59P57076 290 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 JAM2P57087 298 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 CENPCQ03188 943 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 CIR1Q86X95 450 aaPredicted RBP19.4■□□□□ 0.7
TMEM53-201ENST00000372235 STK40Q8N2I9 435 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 FRS2Q8WU20 508 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 ALG14Q96F25 216 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 TBCBQ99426 244 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 MTG2Q9H4K7 406 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 NOCTQ9UK39 431 aaKnown RBP19.4■□□□□ 0.7
TMEM53-201ENST00000372235 APOBEC2Q9Y235 224 aaKnown RBP19.4■□□□□ 0.7
TMEM53-201ENST00000372235 HS3ST2Q9Y278 367 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 ANKRD6Q9Y2G4 727 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 NEUROG3Q9Y4Z2 214 aa19.4■□□□□ 0.7
TMEM53-201ENST00000372235 CNOT1A5YKK6 2376 aaKnown RBP19.39■□□□□ 0.69
TMEM53-201ENST00000372235 IGLV3-10A0A075B6K4 115 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 A0A1B0GVT2 93 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 LGALS16A8MUM7 142 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 GOLGA8SH3BPF8 625 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 MCF2LO15068 1137 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 VILLO15195 856 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 SH3BP5O60239 455 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 OR1E1P30953 314 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 SDC4P31431 198 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 ETFBP38117 255 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 NSFP46459 744 aaKnown RBP19.39■□□□□ 0.69
TMEM53-201ENST00000372235 STK19P49842 368 aaPredicted RBP19.39■□□□□ 0.69
TMEM53-201ENST00000372235 COPB1P53618 953 aaKnown RBP19.39■□□□□ 0.69
TMEM53-201ENST00000372235 SLC20A2Q08357 652 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 PPP1R2P3Q6NXS1 205 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 NCEH1Q6PIU2 408 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 GLRX5Q86SX6 157 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 SH2D3CQ8N5H7 860 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 DCAF4L2Q8NA75 395 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 OR2I1PQ8NGU4 316 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 OR14C36Q8NHC7 312 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 PPARGC1AQ9UBK2 798 aaKnown RBP19.39■□□□□ 0.69
TMEM53-201ENST00000372235 OR51B4Q9Y5P0 310 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 ADAMTS9Q9P2N4 1935 aa19.39■□□□□ 0.69
TMEM53-201ENST00000372235 LAMA1P25391 3075 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ILVBLA1L0T0 632 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 E9PAM4 449 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 YKT6O15498 198 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 MAGEC1O60732 1142 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ENDOD1O94919 500 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 CALB1P05937 261 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 IGHV4-34P06331 123 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 FLT3P36888 993 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 CCT8P50990 548 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ADPRHP54922 357 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 GSCP56915 257 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-201ENST00000372235 UBXN1Q04323 297 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 DLG2Q15700 870 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 OTUD1Q5VV17 481 aaPredicted RBP19.38■□□□□ 0.69
TMEM53-201ENST00000372235 RETSATQ6NUM9 610 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 DBX2Q6ZNG2 339 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 BNIPLQ7Z465 357 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ATP11CQ8NB49 1132 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 SETD7Q8WTS6 366 aaKnown RBP19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ERGIC2Q96RQ1 377 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ADAM33Q9BZ11 813 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ZYG11BQ9C0D3 744 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 NLRC4Q9NPP4 1024 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 WASF3Q9UPY6 502 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 SIK3Q9Y2K2 1263 aa19.38■□□□□ 0.69
TMEM53-201ENST00000372235 ASCC3Q8N3C0 2202 aaKnown RBP19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3DA0A087WVF3 549 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3IA0A087WXS9 549 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3EA0A087X179 549 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3KA0A087X1G2 549 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 ANKRD62A6NC57 917 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3FA6NER0 549 aaPredicted RBP19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3LB9A6J9 549 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 PCDHGA12O60330 932 aa19.37■□□□□ 0.69
TMEM53-201ENST00000372235 TBC1D3HP0C7X1 549 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms