RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 REXO1L1PQ8IX06 675 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 PJA1Q8NG27 643 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 PNKPQ96T60 521 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 ADAM2Q99965 735 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 CHCHD6Q9BRQ6 235 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 CINPQ9BW66 212 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 EPB41L1Q9H4G0 881 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 RMND5AQ9H871 391 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
RAPGEF1-202ENST00000372190 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HIST1H2AGP0C0S8 130 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HIST1H2ADP20671 130 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HK2P52789 917 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 ORC1Q13415 861 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HIST1H2AHQ96KK5 128 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HIST1H2AJQ99878 128 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 H2AFJQ9BTM1 129 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAPRE3Q9UPY8 281 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 NRCAMQ92823 1304 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 USP10Q14694 798 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SCAIQ8N9R8 606 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FOPNLQ96NB1 174 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 WDCPQ9H6R7 721 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 GPN1Q9HCN4 374 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CTNNB1P35222 781 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 GSTA3Q16772 222 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 DGCR6LQ9BY27 220 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 EDARQ9UNE0 448 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CLCA2Q9UQC9 943 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FHOD1Q9Y613 1164 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 UBOX5O94941 541 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SMIM10L2AP0DMW4 78 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SMIM10L2BP0DMW5 78 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 ELNP15502 786 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 KLK7P49862 253 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 IL18R1Q13478 541 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 NFE2Q16621 373 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 OVOS1Q6IE37 1185 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 USP49Q70CQ1 688 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 MYLPFQ96A32 169 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FICDQ9BVA6 458 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 PCDHB5Q9Y5E4 795 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 RPN2P04844 631 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CXCL8P10145 99 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SPRP35270 261 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SERPINB5P36952 375 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 HSD17B3P37058 310 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CYP51A1Q16850 503 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 EGFLAMQ63HQ2 1017 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAAH2Q6GMR7 532 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CASP12Q6UXS9 341 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 WDR49Q8IV35 697 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 CSGALNACT1Q8TDX6 532 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 SRPK1Q96SB4 655 aaKnown RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 ILKAPQ9H0C8 392 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF1-202ENST00000372190 NOL4O94818 638 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLC9A3P48764 834 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 RAB43Q86YS6 212 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 AIFM2Q9BRQ8 373 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 DMTF1Q9Y222 760 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 RIC1Q4ADV7 1423 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAM220BPB1ANY3 271 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 TMEM253P0C7T8 217 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 CNTN1Q12860 1018 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 TSPAN14Q8NG11 270 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 COPS5Q92905 334 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 GAL3ST3Q96A11 431 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 FUT8Q9BYC5 575 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 CELF4Q9BZC1 486 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 ITGA11Q9UKX5 1188 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAFFQ9ULX9 164 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLIT3O75094 1523 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 FAM228BP0C875 321 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAGEA4P43358 317 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 GPR1P46091 355 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 MAZP56270 477 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 PTPAQ15257 358 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 PCSK7Q16549 785 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 BROXQ5VW32 411 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 CBWD2Q8IUF1 395 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 UTP15Q8TED0 518 aaKnown RBP14.28□□□□□ -0.12
RAPGEF1-202ENST00000372190 SYN2Q92777 582 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms