RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PXNP49023 591 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 NRLP54845 237 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 GNA12Q03113 381 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 DPYSL2Q16555 572 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 PTPRNQ16849 979 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ARTNQ5T4W7 220 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 TMEM92Q6UXU6 159 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 RFX8Q6ZV50 586 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 SPON2Q9BUD6 331 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 FAM126AQ9BYI3 521 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 KLHL11Q9NVR0 708 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 ERVW-1Q9UQF0 538 aa15.22■□□□□ 0.03
COL9A1-204ENST00000370496 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
COL9A1-204ENST00000370496 A0A0D9SEW6 157 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 WASH3PC4AMC7 463 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 ARHGAP6O43182 974 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 SRPRAP08240 638 aaKnown RBP15.21■□□□□ 0.02
COL9A1-204ENST00000370496 TDGF1P13385 188 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 NNMTP40261 264 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 FNTBP49356 437 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 STK19P49842 368 aaPredicted RBP15.21■□□□□ 0.02
COL9A1-204ENST00000370496 PLK1P53350 603 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 HADHBP55084 474 aaKnown RBP15.21■□□□□ 0.02
COL9A1-204ENST00000370496 NAP1L1P55209 391 aaKnown RBP15.21■□□□□ 0.02
COL9A1-204ENST00000370496 CDH6P55285 790 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 TAS2R40P59535 323 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 IL31Q6EBC2 164 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 PGBD3Q8N328 593 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 ZNF366Q8N895 744 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 OR7D4Q8NG98 312 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 NDFIP2Q9NV92 336 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 DONSONQ9NYP3 566 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 VPS51Q9UID3 782 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 OR51B4Q9Y5P0 310 aa15.21■□□□□ 0.02
COL9A1-204ENST00000370496 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 RCCD1A6NED2 376 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 CBX4O00257 560 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 BUB1BO60566 1050 aaPredicted RBP15.2■□□□□ 0.02
COL9A1-204ENST00000370496 SLC1A1P43005 524 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 DMWDQ09019 674 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 ENPP2Q13822 863 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 POLD3Q15054 466 aaPredicted RBP15.2■□□□□ 0.02
COL9A1-204ENST00000370496 ODF2Q5BJF6 829 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 C11orf63Q6NUN7 778 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 KIAA1211LQ6NV74 962 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 LONP2Q86WA8 852 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 CACUL1Q86Y37 369 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 LRRC8AQ8IWT6 810 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 MDGA1Q8NFP4 955 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 ATRIPQ8WXE1 791 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 ALG14Q96F25 216 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
COL9A1-204ENST00000370496 MRGPRX3Q96LB0 322 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 CALN1Q9BXU9 219 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 TPSD1Q9BZJ3 242 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 TMEM245Q9H330 911 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 PCDH18Q9HCL0 1135 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 FAM86C1Q9NVL1 165 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 ZSCAN32Q9NX65 697 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 HYOU1Q9Y4L1 999 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 PCDHGA2Q9Y5H1 932 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 FANCMQ8IYD8 2048 aa15.2■□□□□ 0.02
COL9A1-204ENST00000370496 WASH4PA8MWX3 477 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 AXIN1O15169 862 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 BUB1O43683 1085 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 SNAP91O60641 907 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 PTMAP06454 111 aaKnown RBP15.19■□□□□ 0.02
COL9A1-204ENST00000370496 TNNT1P13805 278 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 COMTP21964 271 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 HOXA6P31267 233 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 KIF5AQ12840 1032 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 GSE1Q14687 1217 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 KIAA1324Q6UXG2 1013 aaKnown RBP15.19■□□□□ 0.02
COL9A1-204ENST00000370496 DAAM2Q86T65 1068 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 KDM1BQ8NB78 822 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 CALR3Q96L12 384 aaKnown RBP15.19■□□□□ 0.02
COL9A1-204ENST00000370496 PSMB7Q99436 277 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 CWC15Q9P013 229 aaKnown RBP15.19■□□□□ 0.02
COL9A1-204ENST00000370496 HPCAL4Q9UM19 191 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 R4GN57 208 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 EML5Q05BV3 1969 aa15.19■□□□□ 0.02
COL9A1-204ENST00000370496 EDDM13A0A1B0GTR0 161 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 MACROD2A1Z1Q3 448 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 BTNL10A8MVZ5 291 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 KRT1P04264 644 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 ERCC2P18074 760 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 GABRG2P18507 467 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 NDUFV2P19404 249 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 GLDCP23378 1020 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 ACVRL1P37023 503 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 HCAR3P49019 387 aa15.18■□□□□ 0.02
COL9A1-204ENST00000370496 DPYSQ14117 519 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms