RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ORAI3Q9BRQ5 295 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 TUBGCP2Q9BSJ2 902 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 MUC3BQ9H195 1237 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 WDCPQ9H6R7 721 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 GDF3Q9NR23 364 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.26■□□□□ 0.03
CTSD-202ENST00000367196 FTSJ1Q9UET6 329 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
CTSD-202ENST00000367196 HS3ST4Q9Y661 456 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 SLCO1B1Q9Y6L6 691 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 CFAP47Q6ZTR5 3102 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 WDFY3Q8IZQ1 3526 aa15.26■□□□□ 0.03
CTSD-202ENST00000367196 SRRM3A6NNA2 597 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 H0Y8X5 98 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 ATP9BO43861 1147 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 MAGEC1O60732 1142 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 PAGE1O75459 146 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 LSM8O95777 96 aaKnown RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 ZNF18P17022 549 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 ARRB1P49407 418 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 CENPCQ03188 943 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 CCDC15Q0P6D6 951 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 LAYNQ6UX15 382 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 LRRC31Q6UY01 552 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 CCNI2Q6ZMN8 369 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 AADATQ8N5Z0 425 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 PGAP3Q96FM1 320 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 ELF4Q99607 663 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 FEM1AQ9BSK4 669 aa15.25■□□□□ 0.03
CTSD-202ENST00000367196 C2orf49Q9BVC5 232 aaPredicted RBP15.25■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3DA0A087WVF3 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3IA0A087WXS9 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3EA0A087X179 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3KA0A087X1G2 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 A0A1B0GTQ1 180 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3FA6NER0 549 aaPredicted RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3LB9A6J9 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TPM2P07951 284 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3HP0C7X1 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 EEF1GP26641 437 aaKnown RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 CDH5P33151 784 aaPredicted RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 GABRB2P47870 512 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 SULT1E1P49888 294 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 C5orf22Q49AR2 442 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3GQ6DHY5 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3CQ6IPX1 549 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 NAPEPLDQ6IQ20 393 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TMPRSS7Q7RTY8 843 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 PRPF39Q86UA1 669 aaKnown RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 SLCO6A1Q86UG4 719 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 ERICH1Q86X53 443 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 PROSER1Q86XN7 944 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D3Q8IZP1 549 aaPredicted RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 FRS2Q8WU20 508 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 C18orf8Q96DM3 657 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 SERAC1Q96JX3 654 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TKTL2Q9H0I9 626 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 NUP62CLQ9H1M0 184 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 CCDC86Q9H6F5 360 aaKnown RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 DMTF1Q9Y222 760 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 HS3ST2Q9Y278 367 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 TBC1D30Q9Y2I9 924 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 PKD1L2Q7Z442 2459 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
CTSD-202ENST00000367196 AKAP13Q12802 2813 aa15.24■□□□□ 0.03
CTSD-202ENST00000367196 MCF2LO15068 1137 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 LATO43561 262 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 DKK1O94907 266 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 ITGAVP06756 1048 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 RHOCP08134 193 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 CDK4P11802 303 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 CYP11B1P15538 503 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 CXCR3P49682 368 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 CLCN6P51797 869 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 DEUP1Q05D60 604 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 SCAPQ12770 1279 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 OVGP1Q12889 678 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 KCNJ12Q14500 433 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 DRAP1Q14919 205 aaPredicted RBP15.23■□□□□ 0.03
CTSD-202ENST00000367196 DLG2Q15700 870 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 DPCR1Q3MIW9 517 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 SLC25A52Q3SY17 297 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 MIIPQ5JXC2 388 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 C6orf118Q5T5N4 469 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.23■□□□□ 0.03
CTSD-202ENST00000367196 SETD3Q86TU7 594 aaPredicted RBP15.23■□□□□ 0.03
CTSD-202ENST00000367196 IQCHQ86VS3 1027 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 FAM131CQ96AQ9 280 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 NPY6RQ99463 290 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 SIK2Q9H0K1 926 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 PLCB1Q9NQ66 1216 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 PIGVQ9NUD9 493 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 TOR4AQ9NXH8 423 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 PTPRBP23467 1997 aa15.23■□□□□ 0.03
CTSD-202ENST00000367196 GOLGA8CPA6NN73 597 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms