RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 STK40Q8N2I9 435 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 KYQ8NBH2 561 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 SUSD6Q92537 303 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CXorf56Q9H5V9 222 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CAAP1Q9H8G2 361 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 MIEF1Q9NQG6 463 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ZNF862O60290 1169 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 PEX10O60683 326 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 PSMD5Q16401 504 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 LRRC49Q8IUZ0 686 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 PLD3Q8IV08 490 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 NIFKQ9BYG3 293 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CATSPERZQ9NTU4 200 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 IGLV3-22A0A075B6J6 115 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 FSCN2O14926 492 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 TGM3Q08188 693 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 TTC33Q6PID6 262 aaPredicted RBP16.79■□□□□ 0.28
SCAF8-201ENST00000367178 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 RD3Q7Z3Z2 195 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DEFB107AQ8IZN7 70 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 FIBCD1Q8N539 461 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 FAM120BQ96EK7 910 aaKnown RBP16.79■□□□□ 0.28
SCAF8-201ENST00000367178 MAP3K13O43283 966 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DAB1O75553 588 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ELNP15502 786 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ACADSP16219 412 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 HNRNPH1P31943 449 aaKnown RBP16.79■□□□□ 0.28
SCAF8-201ENST00000367178 PBX1P40424 430 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DDR2Q16832 855 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 FBXL19Q6PCT2 694 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DENND1CQ8IV53 801 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 CORO1BQ9BR76 489 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 MAF1Q9H063 256 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DCLRE1BQ9H816 532 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.284e-8■■■■□ 26.1
SCAF8-201ENST00000367178 FAM50BQ9Y247 325 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 TBC1D3BA6NDS4 549 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 USP1O94782 785 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ALADP13716 330 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 PTPN3P26045 913 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 FNDC5Q8NAU1 212 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 DHX33Q9H6R0 707 aaKnown RBP16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ICAM3P32942 547 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 CSTF3Q12996 717 aaKnown RBP16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ADCK1Q86TW2 530 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 ZDHHC6Q9H6R6 413 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 GOLGA2P5Q9HBQ8 144 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 AHSPQ9NZD4 102 aa16.79■□□□□ 0.28
SCAF8-201ENST00000367178 CTNNB1P35222 781 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 DRG2P55039 364 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 TBL3Q12788 808 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 C16orf46Q6P387 395 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 LRRC8DQ7L1W4 858 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 MILR1Q7Z6M3 343 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ZNF614Q8N883 585 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 CERS2Q96G23 380 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 DEFB118Q96PH6 123 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 PLIN4Q96Q06 1357 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 BUD23O43709 281 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 APOA1P02647 267 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ADH1AP07327 375 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 DSG1Q02413 1049 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 JOSD2Q8TAC2 188 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 LGMNQ99538 433 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 MLPHQ9BV36 600 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 TM6SF2Q9BZW4 377 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 LHX5Q9H2C1 402 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 PADI4Q9UM07 663 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 NT5C1B-RDH14C9J2C7 533 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 TLR5O60602 858 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 MMP8P22894 467 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 IL2P60568 153 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 MRPS35P82673 323 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 CREMQ03060 361 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 MAD2L1Q13257 205 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 UNC5AQ6ZN44 842 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 SEMA3CQ99985 751 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 TMEM191CA6NGB0 347 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ZNF682O95780 498 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 SNRPD1P62314 119 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 PHKG1Q16816 387 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 ALG3Q92685 438 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-201ENST00000367178 PCDHB18PQ96TA0 734 aa16.78■□□□□ 0.28
SCAF8-201ENST00000367178 CCDC3Q9BQI4 270 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms