RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SOX5P35711 763 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GRIA4P48058 902 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SULT1E1P49888 294 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 AFF3P51826 1226 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 COPB1P53618 953 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CDR2Q01850 454 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 DEUP1Q05D60 604 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 HNRNPDQ14103 355 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ELAVL3Q14576 367 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 HLA-BQ31612 363 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ACBD5Q5T8D3 534 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FAM102AQ5T9C2 384 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 KIAA0895LQ68EN5 471 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 IL27RAQ6UWB1 636 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 STK40Q8N2I9 435 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CAMK1GQ96NX5 476 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PPP1R9BQ96SB3 815 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PSMB7Q99436 277 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SIK2Q9H0K1 926 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GAREM1Q9H706 876 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TMPRSS4Q9NRS4 437 aa14.06□□□□□ -0.16
TNFRSF1A-202ENST00000366159 A0A1B0GVT2 93 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 A0A1W2PPC4 97 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FAM221BA6H8Z2 402 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FSBPO95073 299 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ADH1BP00325 375 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 UNGP13051 313 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GOT1P17174 413 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 C5AR1P21730 350 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NNMTP40261 264 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NUMBP49757 651 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 METAP1P53582 386 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 POLR2FP61218 127 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MYL5Q02045 173 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FOXC1Q12948 553 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PTP4A2Q12974 167 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 KIF19Q2TAC6 998 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NAA35Q5VZE5 725 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RNF219Q5W0B1 726 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NCEH1Q6PIU2 408 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SETD3Q86TU7 594 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NAXDQ8IW45 347 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 OR2T34Q8NGX1 318 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 BAHD1Q8TBE0 780 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CFAP57Q96MR6 1250 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SPAG5Q96R06 1193 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 HAPLN3Q96S86 360 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FAM207AQ9NSI2 230 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ANO10Q9NW15 660 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SARDHQ9UL12 918 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FNDC3AQ9Y2H6 1198 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PCDHGB2Q9Y5G2 931 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SNX10Q9Y5X0 201 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 DOCK4Q8N1I0 1966 aa14.05□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PLXNA2O75051 1894 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FAM170AA1A519 330 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 LGALS16A8MUM7 142 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MCF2LO15068 1137 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RNASEH2AO75792 299 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CER1O95813 267 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SPINK2P20155 84 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CCR5P51681 352 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ADPRHP54922 357 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GSCP56915 257 aaPredicted RBP14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 FKBP15Q5T1M5 1219 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SASS6Q6UVJ0 657 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SND1Q7KZF4 910 aaKnown RBP eCLIP14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GLRX5Q86SX6 157 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SH2D3CQ8N5H7 860 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SNX19Q92543 992 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ERGIC2Q96RQ1 377 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PCDHB18PQ96TA0 734 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SCNM1Q9BWG6 230 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 NLRC4Q9NPP4 1024 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 TM7SF3Q9NS93 570 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PCOLCE2Q9UKZ9 415 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PPM1HQ9ULR3 514 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PAXBP1Q9Y5B6 917 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SNX11Q9Y5W9 270 aa14.04□□□□□ -0.16
TNFRSF1A-202ENST00000366159 KNL1Q8NG31 2342 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 LRRC72A6NJI9 287 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 E9PAM4 449 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 GOLGA8SH3BPF8 625 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 VILLO15195 856 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 ALOX15BO15296 676 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 LATO43561 262 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 MT-CO1P00395 513 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 SRCP12931 536 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 RDXP35241 583 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 CTSKP43235 329 aa14.03□□□□□ -0.16
TNFRSF1A-202ENST00000366159 PSMD8P48556 350 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms