RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 ENO3P13929 434 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 MALP21145 153 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 SMARCA1P28370 1054 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 HOXA13P31271 388 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 HOXD12P35452 270 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 TIRAPP58753 221 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 SLC20A2Q08357 652 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 ANXA2RQ3ZCQ2 193 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 GLE1Q53GS7 698 aaKnown RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 ALG10Q5BKT4 473 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 ALG10BQ5I7T1 473 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 TOR2AQ5JU69 321 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 DSG4Q86SJ6 1040 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 SPARTQ8N0X7 666 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 ZSWIM2Q8NEG5 633 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 KLHDC9Q8NEP7 349 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 OR2T6Q8NHC8 308 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 RFWD2Q8NHY2 731 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 NRG4Q8WWG1 115 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 RASL10AQ92737 203 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 GJA10Q969M2 543 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 RNF26Q9BY78 433 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 LDHAL6BQ9BYZ2 381 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 TRIM2Q9C040 744 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 PNRC2Q9NPJ4 139 aaKnown RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 SLC52A3Q9NQ40 469 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 INTS10Q9NVR2 710 aaKnown RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 ZNF624Q9P2J8 865 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 EPHA6Q9UF33 1036 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 PLAAQ9Y263 795 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 VDAC3Q9Y277 283 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 UMODL1Q5DID0 1318 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 RYR3Q15413 4870 aa-0.16□□□□□ -2.44
RNU6-228P-201ENST00000362700 UNCXA6NJT0 531 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 NT5C1B-RDH14C9J2C7 533 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 STMND1H3BQB6 276 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 EXOC5O00471 708 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 ZSCAN9O15535 394 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 KPNA6O60684 536 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 ENO1P06733 434 aaKnown RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 ZNF853P0CG23 659 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 CPEP16870 476 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 KLK2P20151 261 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 KLRC1P26715 233 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 MXI1P50539 228 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 HUNKP57058 714 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 IL2P60568 153 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 C15orf32Q32M92 178 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 TYW3Q6IPR3 259 aaKnown RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 NAA40Q86UY6 237 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 ZBED8Q8IZ13 594 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 GPD1LQ8N335 351 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 DDHD1Q8NEL9 900 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 CPT1BQ92523 772 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 FIG4Q92562 907 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 TNPO1Q92973 898 aaKnown RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 SENP5Q96HI0 755 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 CLUHP3Q96NS8 147 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 SOSTQ9BQB4 213 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 C1orf43Q9BWL3 253 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 SPRR2GQ9BYE4 73 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 B3GNT4Q9C0J1 378 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 CHST8Q9H2A9 424 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 CCSER2Q9H7U1 834 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 RNF146Q9NTX7 359 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 NKX1-2Q9UD57 310 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 FBXL17Q9UF56 701 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 SAP30BPQ9UHR5 308 aaKnown RBP-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 MSRB2Q9Y3D2 182 aa-0.17□□□□□ -2.44
RNU6-228P-201ENST00000362700 MAST4O15021 2626 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 PRYO14603 147 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 CDX4O14627 284 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 PROS1P07225 676 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 TMIGD3P0DMS9 266 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 THPOP40225 353 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 LIFRP42702 1097 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 TUBB2AQ13885 445 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 DHX34Q14147 1143 aaKnown RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 NFE2L2Q16236 605 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 FNDC3BQ53EP0 1204 aaKnown RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 RSBN1Q5VWQ0 802 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 FAM53AQ6NSI3 398 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 SLC27A1Q6PCB7 646 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 GPRIN3Q6ZVF9 776 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 SLC25A41Q8N5S1 370 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 KDM1BQ8NB78 822 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 PPHLN1Q8NEY8 458 aaKnown RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 PPP2R3CQ969Q6 453 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 HDAC10Q969S8 669 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 OMA1Q96E52 524 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 TTC14Q96N46 770 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 VRK1Q99986 396 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 TUBB2BQ9BVA1 445 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 FGFBP2Q9BYJ0 223 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 TGIF2Q9GZN2 237 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 SMARCAL1Q9NZC9 954 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 ASIC3Q9UHC3 531 aa-0.18□□□□□ -2.44
RNU6-228P-201ENST00000362700 SLC4A4Q9Y6R1 1079 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms