RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 POLNQ7Z5Q5 900 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ZDHHC17Q8IUH5 632 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 COLGALT1Q8NBJ5 622 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 SLAIN1Q8ND83 568 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 TMEM174Q8WUU8 243 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 CDKL2Q92772 493 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ART4Q93070 314 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 CEP295NLQ96MC4 621 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 TTC25Q96NG3 672 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 FSD1LQ9BXM9 530 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 PRDM12Q9H4Q4 367 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 DSEQ9UL01 958 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 CNTN6Q9UQ52 1028 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 MFHAS1Q9Y4C4 1052 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 CFAP69A5D8W1 941 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 FAM155AB1AL88 458 aaPredicted RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 GMNNO75496 209 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ERCC2P18074 760 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 TLE2Q04725 743 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 SLC34A1Q06495 639 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 STAT4Q14765 748 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ATPAF2Q8N5M1 289 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 SLC25A41Q8N5S1 370 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 PLD5Q8N7P1 536 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 RSPH1Q8WYR4 309 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 HSPBAP1Q96EW2 488 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 YME1L1Q96TA2 773 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 HNRNPABQ99729 332 aaKnown RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 Q9H521 79 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 PCDHB5Q9Y5E4 795 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 A0A0J9YVX5 310 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 CCDC195A0A1B0GUA6 201 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 FBXO21O94952 628 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 HOXD11P31277 338 aaPredicted RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 HALP42357 657 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ATP1A4Q13733 1029 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 ACAP1Q15027 740 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 WASHC2DQ5SRD0 308 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 UBAP2Q5T6F2 1119 aaKnown RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 MROH9Q5TGP6 573 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 OTOP2Q7RTS6 562 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 RYBPQ8N488 228 aaPredicted RBP9.38□□□□□ -0.91
CALD1-202ENST00000361901 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 TBC1D13Q9NVG8 400 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
CALD1-202ENST00000361901 GOLGA8TH3BQL2 631 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 ARVCFO00192 962 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 UNC5CO95185 931 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 RPLP2P05387 115 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 GPR15P49685 360 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 SLC25A11Q02978 314 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 MORF4L2Q15014 288 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 PRSS55Q6UWB4 352 aaPredicted RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 CRYBG2Q8N1P7 616 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 HTR3CQ8WXA8 447 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 CSPG4P5Q96PW8 444 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 OXCT2Q9BYC2 517 aaPredicted RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 SP110Q9HB58 689 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 AASDHPPTQ9NRN7 309 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 BFARQ9NZS9 450 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 MOSPD1Q9UJG1 213 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 RNF103O00237 685 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 KRT36O76013 467 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 ACRP10323 421 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 TNFRSF8P28908 595 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 SLC25A52Q3SY17 297 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 FNIP1Q8TF40 1166 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 TBC1D10AQ9BXI6 508 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 VPS11Q9H270 941 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 KIF13BQ9NQT8 1826 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 TBX18O95935 607 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 AGTP01019 485 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 OCM2P0CE71 109 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 OR1D2P34982 312 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 ABCG1P45844 678 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 SLC5A3P53794 718 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 AP2B1P63010 937 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 BNIP1Q12981 228 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms