RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FOXQ1Q9C009 403 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 EPHX3Q9H6B9 360 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 LMAN1LQ9HAT1 526 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 VPS28Q9UK41 221 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 PLA2G4CQ9UP65 541 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 RAD54BQ9Y620 910 aa14.18□□□□□ -0.14
NSMCE1-201ENST00000361439 ZSCAN5CA6NGD5 496 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TRIM24O15164 1050 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 FTCDO95954 541 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 SRPRAP08240 638 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 CD48P09326 243 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TNNT1P13805 278 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 CSKP41240 450 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 CDKN2BP42772 138 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 NUBP1P53384 320 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 GEMIN4P57678 1058 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 MESP2Q0VG99 397 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TFDP2Q14188 446 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 PAFAH1B3Q15102 231 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 FUT11Q495W5 492 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TFDP3Q5H9I0 405 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 MEI1Q5TIA1 1274 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 RNF219Q5W0B1 726 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TMEM215Q68D42 235 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 CWF19L1Q69YN2 538 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 FBXL6Q8N531 539 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 USP33Q8TEY7 942 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 KRT35Q92764 455 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 EZH1Q92800 747 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 ACE2Q9BYF1 805 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 CHRDQ9H2X0 955 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 LRRC19Q9H756 370 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 THAP10Q9P2Z0 257 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 DNAI1Q9UI46 699 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 INTS6Q9UL03 887 aaKnown RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 HPCAL4Q9UM19 191 aa14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 MTF2Q9Y483 593 aaPredicted RBP14.17□□□□□ -0.14
NSMCE1-201ENST00000361439 ARHGAP42A6NI28 874 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 CHRM1P11229 460 aaPredicted RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 AMPD1P23109 780 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 MZF1P28698 734 aaPredicted RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 NNMTP40261 264 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 NR2C2P49116 596 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 CLCN6P51797 869 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 ECT2LQ008S8 904 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 ENPP2Q13822 863 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 SDE2Q6IQ49 451 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 MFSD7Q6UXD7 560 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 SPOCD1Q6ZMY3 1216 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 BZW1Q7L1Q6 419 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 SPEM1Q8N4L4 309 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 ZNF513Q8N8E2 541 aaPredicted RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 PCDH19Q8TAB3 1148 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 CASKIN2Q8WXE0 1202 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 ARHGEF2Q92974 986 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 KLC2Q9H0B6 622 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 NOL6Q9H6R4 1146 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 NDFIP2Q9NV92 336 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 TRMT1Q9NXH9 659 aaKnown RBP14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
NSMCE1-201ENST00000361439 A0A0D9SEW6 157 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 RASA4BC9J798 803 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 DDX3YO15523 660 aaKnown RBP14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 RASA4O43374 803 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 KDELR3O43731 214 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 RNF40O75150 1001 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 MX2P20592 715 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 ST8SIA6P61647 398 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 MMRN1Q13201 1228 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 SERINC3Q13530 473 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 EOGTQ5NDL2 527 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 TMCO4Q5TGY1 634 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 IL31Q6EBC2 164 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 APCDD1Q8J025 514 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 PQLC3Q8N755 202 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 IL17RCQ8NAC3 791 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 OR52K2Q8NGK3 314 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 ALG3Q92685 438 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 GABRG3Q99928 467 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 BRD8Q9H0E9 1235 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 CARD9Q9H257 536 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 ATP13A1Q9HD20 1204 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 KLHL11Q9NVR0 708 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 SLC25A13Q9UJS0 675 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 SLC8A2Q9UPR5 921 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
NSMCE1-201ENST00000361439 hCG_1818297A0A087WSY0 165 aa14.14□□□□□ -0.15
NSMCE1-201ENST00000361439 APOL1O14791 398 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms