RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CYP2A13Q16696 494 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SHCBP1LQ9BZQ2 653 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ARMC7Q9H6L4 198 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 LTBP3Q9NS15 1303 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 FZD9O00144 591 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PSMD12O00232 456 aaPredicted RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PCNAP12004 261 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 BOP1Q14137 746 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 GRM3Q14832 879 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CYTH1Q15438 398 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SLC25A52Q3SY17 297 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PAGE2BQ5JRK9 111 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 UBE2E3Q969T4 207 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 QRFPRQ96P65 431 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ACOX2Q99424 681 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 PHACTR1Q9C0D0 580 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 MORF4L1Q9UBU8 362 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 NUDT5Q9UKK9 219 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 GJB6O95452 261 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 BGNP21810 368 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TNFRSF8P28908 595 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 RRM2P31350 389 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TTPAP49638 278 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CLCN5P51795 746 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ICE2Q659A1 982 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TPGS1Q6ZTW0 290 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 KRT78Q8N1N4 520 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ALLCQ8N6M5 410 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TMCO5AQ8N6Q1 288 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 IRGQQ8WZA9 623 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 DPY30Q9C005 99 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ALADP13716 330 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CLK2P49760 499 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 THOP1P52888 689 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 KLC1Q07866 573 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ECM1Q16610 540 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 PHF21AQ96BD5 680 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 FAM136AQ96C01 138 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.7□□□□□ -0.22
LDB3-202ENST00000361373 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CXCL14O95715 111 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 ABHD2P08910 425 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SERPINB5P36952 375 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 SH3D19Q5HYK7 790 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 LRRC8DQ7L1W4 858 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 CENPLQ8N0S6 344 aaPredicted RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 CXorf40AQ8TE69 158 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 DIS3LQ8TF46 1054 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 GFM2Q969S9 779 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
LDB3-202ENST00000361373 ACTL7BQ9Y614 415 aa13.7□□□□□ -0.22
LDB3-202ENST00000361373 FSCN2O14926 492 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.22
LDB3-202ENST00000361373 RASA2Q15283 850 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 KCNA10Q16322 511 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 AFTPHQ6ULP2 937 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 RPAINQ86UA6 219 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 STAG3L4Q8TBR4 150 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 FNIP1Q8TF40 1166 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 CYGBQ8WWM9 190 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 DNAJC9Q8WXX5 260 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 MAGEB10Q96LZ2 347 aaPredicted RBP13.69□□□□□ -0.22
LDB3-202ENST00000361373 TMEM120AQ9BXJ8 343 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 PRDM12Q9H4Q4 367 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 TBC1D14Q9P2M4 693 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 C15orf38-AP3S2A0A0A6YYH1 394 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
LDB3-202ENST00000361373 SLC1A6P48664 564 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 ARPINQ7Z6K5 226 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 TCP10LQ8TDR4 215 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 AENQ8WTP8 325 aaKnown RBP13.69□□□□□ -0.22
LDB3-202ENST00000361373 PRRG3Q9BZD7 231 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 IMPAD1Q9NX62 359 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 FBXO10Q9UK96 956 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 SIGLEC1Q9BZZ2 1709 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 hCG_1818297A0A087WSY0 165 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 SYN3O14994 580 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 ELNP15502 786 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 ERCC2P18074 760 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 IGFBP4P22692 258 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 ADRA1DP25100 572 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 OR1D2P34982 312 aa13.69□□□□□ -0.22
LDB3-202ENST00000361373 HIRAP54198 1017 aaPredicted RBP13.69□□□□□ -0.22
LDB3-202ENST00000361373 DYNC1I2Q13409 638 aaKnown RBP13.69□□□□□ -0.22
LDB3-202ENST00000361373 PPP1R26Q5T8A7 1209 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms